RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 MARC1Q5VT66 337 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 GCNT7Q6ZNI0 430 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 VSIG1Q86XK7 387 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 BBS5Q8N3I7 341 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 SPC24Q8NBT2 197 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 SETD7Q8WTS6 366 aaKnown RBP23.86■■□□□ 1.41
VARS-217ENST00000440048 MGME1Q9BQP7 344 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 GOLPH3Q9H4A6 298 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 ERVMER34-1Q9H9K5 563 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 PCDH12Q9NPG4 1184 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 IMPACTQ9P2X3 320 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 REXO2Q9Y3B8 237 aaKnown RBP23.86■■□□□ 1.41
VARS-217ENST00000440048 ALG6Q9Y672 507 aa23.86■■□□□ 1.41
VARS-217ENST00000440048 MAP1BP46821 2468 aaKnown RBP23.85■■□□□ 1.41
VARS-217ENST00000440048 RCCD1A6NED2 376 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 PCDHGA12O60330 932 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 MMP20O60882 483 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 THEGLP0DJG4 465 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 PMLP29590 882 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 MMP13P45452 471 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 FAM193AP78312 1265 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 SLC10A2Q12908 348 aaPredicted RBP23.85■■□□□ 1.41
VARS-217ENST00000440048 SUZ12Q15022 739 aaKnown RBP23.85■■□□□ 1.41
VARS-217ENST00000440048 SHBQ15464 509 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 IFI16Q16666 785 aaKnown RBP23.85■■□□□ 1.41
VARS-217ENST00000440048 TMEM52BQ4KMG9 183 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 ABI3BPQ7Z7G0 1075 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 TEX26Q8N6G2 289 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 CXorf40AQ8TE69 158 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 ASB12Q8WXK4 309 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 ECHDC3Q96DC8 303 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 BMFQ96LC9 184 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 TSGA13Q96PP4 275 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 LENG8Q96PV6 779 aaPredicted RBP23.85■■□□□ 1.41
VARS-217ENST00000440048 NUDCD1Q96RS6 583 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 KLF6Q99612 283 aaPredicted RBP23.85■■□□□ 1.41
VARS-217ENST00000440048 BAG1Q99933 345 aaPredicted RBP23.85■■□□□ 1.41
VARS-217ENST00000440048 DDX56Q9NY93 547 aaKnown RBP23.85■■□□□ 1.41
VARS-217ENST00000440048 SALL4Q9UJQ4 1053 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 ANGPTL2Q9UKU9 493 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 HS3ST3A1Q9Y663 406 aa23.85■■□□□ 1.41
VARS-217ENST00000440048 SPAARA0A1B0GVQ0 90 aa23.84■■□□□ 1.41
VARS-217ENST00000440048 TRAFD1O14545 582 aaPredicted RBP23.84■■□□□ 1.41
VARS-217ENST00000440048 IPO7O95373 1038 aaKnown RBP23.84■■□□□ 1.41
VARS-217ENST00000440048 MAXP61244 160 aa23.84■■□□□ 1.41
VARS-217ENST00000440048 ELP6Q0PNE2 266 aa23.84■■□□□ 1.41
VARS-217ENST00000440048 HNRNPDQ14103 355 aaKnown RBP23.84■■□□□ 1.41
VARS-217ENST00000440048 TMEM139Q8IV31 216 aa23.84■■□□□ 1.41
VARS-217ENST00000440048 PLD5Q8N7P1 536 aa23.84■■□□□ 1.41
VARS-217ENST00000440048 OR13H1Q8NG92 308 aa23.84■■□□□ 1.41
VARS-217ENST00000440048 MAML1Q92585 1016 aa23.84■■□□□ 1.41
VARS-217ENST00000440048 RNF25Q96BH1 459 aaPredicted RBP23.84■■□□□ 1.41
VARS-217ENST00000440048 WRAP53Q9BUR4 548 aaKnown RBP23.84■■□□□ 1.41
VARS-217ENST00000440048 NOD2Q9HC29 1040 aa23.84■■□□□ 1.41
VARS-217ENST00000440048 NT5MQ9NPB1 228 aa23.84■■□□□ 1.41
VARS-217ENST00000440048 SCUBE2Q9NQ36 999 aa23.84■■□□□ 1.41
VARS-217ENST00000440048 DTLQ9NZJ0 730 aa23.84■■□□□ 1.41
VARS-217ENST00000440048 PCOLCE2Q9UKZ9 415 aa23.84■■□□□ 1.41
VARS-217ENST00000440048 CACNA1BQ00975 2339 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.83■■□□□ 1.41
VARS-217ENST00000440048 POM121BA6NF01 834 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 RIOK3O14730 519 aaKnown RBP23.83■■□□□ 1.41
VARS-217ENST00000440048 MATN3O15232 486 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 FLRT2O43155 660 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 CBFA2T3O75081 653 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 PRKCGP05129 697 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 MX2P20592 715 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 CCNCP24863 283 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 SHC2P98077 582 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 ODF2Q5BJF6 829 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 SLC9A4Q6AI14 798 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 TIGD7Q6NT04 549 aaPredicted RBP23.83■■□□□ 1.41
VARS-217ENST00000440048 OXR1Q8N573 874 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 ACRBPQ8NEB7 543 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.83■■□□□ 1.41
VARS-217ENST00000440048 LRRN4Q8WUT4 740 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 MAK16Q9BXY0 300 aaKnown RBP23.83■■□□□ 1.41
VARS-217ENST00000440048 BTBD3Q9Y2F9 522 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 ATP8A1Q9Y2Q0 1164 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 PCDHB9Q9Y5E1 797 aa23.83■■□□□ 1.41
VARS-217ENST00000440048 TDRD6O60522 2096 aaKnown RBP23.82■■□□□ 1.4
VARS-217ENST00000440048 A6NNZ2 444 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 PSTPIP1O43586 416 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 TM7SF2O76062 418 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 RXRGP48443 463 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 ARRB1P49407 418 aaPredicted RBP23.82■■□□□ 1.4
VARS-217ENST00000440048 SIM1P81133 766 aaPredicted RBP23.82■■□□□ 1.4
VARS-217ENST00000440048 SEMG2Q02383 582 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 TRIP6Q15654 476 aaKnown RBP23.82■■□□□ 1.4
VARS-217ENST00000440048 C11orf63Q6NUN7 778 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 ERAP2Q6P179 960 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 MFSD7Q6UXD7 560 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 KYAT3Q6YP21 454 aaKnown RBP23.82■■□□□ 1.4
VARS-217ENST00000440048 Q6ZSR6 202 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 PAF1Q8N7H5 531 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 DENND6BQ8NEG7 585 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 TPCN2Q8NHX9 752 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 FAM174AQ8TBP5 190 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 RHBDD1Q8TEB9 315 aa23.82■■□□□ 1.4
VARS-217ENST00000440048 FATE1Q969F0 183 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms