RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 UPK3BL2E5RIL1 263 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 PRAMEF26H0Y7S4 382 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 KCNK1O00180 336 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 NEMP1O14524 444 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 ARHGAP33O14559 1287 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 MTSS1O43312 755 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 HTRA2O43464 458 aaPredicted RBP11.92□□□□□ -0.5
HSPG2-206ENST00000439717 GJB3O75712 270 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 JCHAINP01591 159 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 HLA-DQB2P05538 268 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 PECAM1P16284 738 aaPredicted RBP11.92□□□□□ -0.5
HSPG2-206ENST00000439717 NFKBIAP25963 317 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 MAT2AP31153 395 aaKnown RBP11.92□□□□□ -0.5
HSPG2-206ENST00000439717 GRIA4P48058 902 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 LIMK1P53667 647 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 ITKQ08881 620 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 XRCC4Q13426 336 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 PRKD1Q15139 912 aaPredicted RBP11.92□□□□□ -0.5
HSPG2-206ENST00000439717 LLGL1Q15334 1064 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 ZNF284Q2VY69 593 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 TMEM52BQ4KMG9 183 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 TMEM259Q4ZIN3 620 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 SLC45A4Q5BKX6 768 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 CCDC181Q5TID7 509 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 NAPEPLDQ6IQ20 393 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 ERAP2Q6P179 960 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 TRIM58Q8NG06 486 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 NETO1Q8TDF5 533 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 ASB12Q8WXK4 309 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 SERAC1Q96JX3 654 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 SEMA3CQ99985 751 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 EDEM2Q9BV94 578 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 SAE1Q9UBE0 346 aaPredicted RBP11.92□□□□□ -0.5
HSPG2-206ENST00000439717 ZFR2Q9UPR6 939 aaKnown RBP11.92□□□□□ -0.5
HSPG2-206ENST00000439717 NUMA1Q14980 2115 aa11.92□□□□□ -0.5
HSPG2-206ENST00000439717 FAM186AA6NE01 2351 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 RIF1Q5UIP0 2472 aaKnown RBP11.91□□□□□ -0.5
HSPG2-206ENST00000439717 TTC24A2A3L6 582 aaPredicted RBP11.91□□□□□ -0.5
HSPG2-206ENST00000439717 CFAP69A5D8W1 941 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 GOLGA6L9A6NEM1 432 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 RIOK3O14730 519 aaKnown RBP11.91□□□□□ -0.5
HSPG2-206ENST00000439717 VILLO15195 856 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 SPINT1O43278 529 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 ZNF189O75820 626 aaPredicted RBP11.91□□□□□ -0.5
HSPG2-206ENST00000439717 ENGP17813 658 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 CA4P22748 312 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 CD38P28907 300 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 ZBTB17Q13105 803 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 NOMO1Q15155 1222 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 TEX44Q53QW1 395 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 ARMC12Q5T9G4 340 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 MEI1Q5TIA1 1274 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 SEL1L3Q68CR1 1132 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 IL27RAQ6UWB1 636 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 PAF1Q8N7H5 531 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 MFSD2AQ8NA29 543 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 ARRDC2Q8TBH0 407 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 FAM174AQ8TBP5 190 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 CXorf40AQ8TE69 158 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 LRRN4Q8WUT4 740 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 HAUS1Q96CS2 278 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 NSMCE3Q96MG7 304 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 SLC6A18Q96N87 628 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 QKIQ96PU8 341 aaKnown RBP eCLIP11.91□□□□□ -0.5
HSPG2-206ENST00000439717 VAT1Q99536 393 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 C1QTNF2Q9BXJ5 285 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 SLC17A9Q9BYT1 436 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 PCDH12Q9NPG4 1184 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 TMEM9BQ9NQ34 198 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 PHTF1Q9UMS5 762 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 PCDHGC4Q9Y5F7 938 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 SLCO1B1Q9Y6L6 691 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 RALGAPA1Q6GYQ0 2036 aa11.91□□□□□ -0.5
HSPG2-206ENST00000439717 EP300Q09472 2414 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-206ENST00000439717 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-206ENST00000439717 SLC31A1O15431 190 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 ZSCAN12O43309 604 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 MAGEC1O60732 1142 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 PGLSO95336 258 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 CPP00450 1065 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 HNRNPA2B1P22626 353 aaKnown RBP11.9□□□□□ -0.5
HSPG2-206ENST00000439717 AKT2P31751 481 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 MMP12P39900 470 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 CSNK1EP49674 416 aaKnown RBP11.9□□□□□ -0.5
HSPG2-206ENST00000439717 ATXN3P54252 364 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-206ENST00000439717 OTUD4Q01804 1114 aaKnown RBP11.9□□□□□ -0.5
HSPG2-206ENST00000439717 DSC2Q02487 901 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 OVGP1Q12889 678 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 TRAF2Q12933 501 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 GRIK2Q13002 908 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 SGCGQ13326 291 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 ZNF211Q13398 564 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-206ENST00000439717 STAT4Q14765 748 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 RPS6KA1Q15418 735 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 SLC14A2Q15849 920 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 ADAT2Q7Z6V5 191 aaKnown RBP11.9□□□□□ -0.5
HSPG2-206ENST00000439717 ZC3H18Q86VM9 953 aaKnown RBP11.9□□□□□ -0.5
HSPG2-206ENST00000439717 IQCHQ86VS3 1027 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 ZSWIM9Q86XI8 627 aa11.9□□□□□ -0.5
HSPG2-206ENST00000439717 NDUFAF2Q8N183 169 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms