RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 FUCA2Q9BTY2 467 aa11.61□□□□□ -0.55
IRF1-204ENST00000439555 KLC2Q9H0B6 622 aa11.61□□□□□ -0.55
IRF1-204ENST00000439555 ISCUQ9H1K1 167 aa11.61□□□□□ -0.55
IRF1-204ENST00000439555 PDFQ9HBH1 243 aa11.61□□□□□ -0.55
IRF1-204ENST00000439555 MRPL47Q9HD33 250 aaKnown RBP11.61□□□□□ -0.55
IRF1-204ENST00000439555 EVA1BQ9NVM1 165 aa11.61□□□□□ -0.55
IRF1-204ENST00000439555 NLGN3Q9NZ94 848 aa11.61□□□□□ -0.55
IRF1-204ENST00000439555 AP4E1Q9UPM8 1137 aa11.61□□□□□ -0.55
IRF1-204ENST00000439555 CLCA2Q9UQC9 943 aa11.61□□□□□ -0.55
IRF1-204ENST00000439555 SSUH2Q9Y2M2 353 aa11.61□□□□□ -0.55
IRF1-204ENST00000439555 BZW2Q9Y6E2 419 aaKnown RBP11.61□□□□□ -0.55
IRF1-204ENST00000439555 SCINQ9Y6U3 715 aa11.61□□□□□ -0.55
IRF1-204ENST00000439555 DOCK9Q9BZ29 2069 aa11.61□□□□□ -0.55
IRF1-204ENST00000439555 TSPAN11A1L157 253 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 ARHGAP42A6NI28 874 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 H3BM21 787 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 DDX3XO00571 662 aaKnown RBP eCLIP11.6□□□□□ -0.55
IRF1-204ENST00000439555 TPP1O14773 563 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 SPINT1O43278 529 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 PRPSAP2O60256 369 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 PRAMEF11O60813 436 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 SDC3O75056 442 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 DXOO77932 396 aaKnown RBP11.6□□□□□ -0.55
IRF1-204ENST00000439555 GP1BAP07359 652 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 TIMP2P16035 220 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 PCK1P35558 622 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 CSRP3P50461 194 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 SRSF1Q07955 248 aaKnown RBP eCLIP11.6□□□□□ -0.55
IRF1-204ENST00000439555 NSUN2Q08J23 767 aaKnown RBP eCLIP11.6□□□□□ -0.55
IRF1-204ENST00000439555 ELP6Q0PNE2 266 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 CCDC173Q0VFZ6 552 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 PTK2BQ14289 1009 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 RFTN1Q14699 578 aaPredicted RBP11.6□□□□□ -0.55
IRF1-204ENST00000439555 ATXN7L2Q5T6C5 722 aaPredicted RBP11.6□□□□□ -0.55
IRF1-204ENST00000439555 AFMIDQ63HM1 303 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 CAVIN1Q6NZI2 390 aaKnown RBP11.6□□□□□ -0.55
IRF1-204ENST00000439555 BRAT1Q6PJG6 821 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 LEKR1Q6ZMV7 388 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 RFX8Q6ZV50 586 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 PTAR1Q7Z6K3 402 aaPredicted RBP11.6□□□□□ -0.55
IRF1-204ENST00000439555 DNAAF5Q86Y56 855 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 LZTR1Q8N653 840 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 DCBLD1Q8N8Z6 715 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 BTN2A2Q8WVV5 523 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 TTC9Q92623 222 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 IQCDQ96DY2 449 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 MED8Q96G25 268 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 TUBGCP5Q96RT8 1024 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 LGMNQ99538 433 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 DPH1Q9BZG8 443 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 UCKL1Q9NWZ5 548 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 DNAJC28Q9NX36 388 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 NCKIPSDQ9NZQ3 722 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 LHX3Q9UBR4 397 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 UBA2Q9UBT2 640 aaPredicted RBP11.6□□□□□ -0.55
IRF1-204ENST00000439555 HECTD1Q9ULT8 2610 aa11.6□□□□□ -0.55
IRF1-204ENST00000439555 TDRD6O60522 2096 aaKnown RBP11.59□□□□□ -0.55
IRF1-204ENST00000439555 A0A1W2PQJ5 194 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 CFAP69A5D8W1 941 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 TMCO5BA8MYB1 307 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 EEF2KO00418 725 aaKnown RBP11.59□□□□□ -0.55
IRF1-204ENST00000439555 TM7SF2O76062 418 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 SERPINC1P01008 464 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 MIPP30301 263 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 DUSP3P51452 185 aaPredicted RBP11.59□□□□□ -0.55
IRF1-204ENST00000439555 PCBP4P57723 403 aaKnown RBP11.59□□□□□ -0.55
IRF1-204ENST00000439555 ERVPABLB-1P60509 514 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 TPM4P67936 248 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 AGERQ15109 404 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 UGP2Q16851 508 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 TMEM52BQ4KMG9 183 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 BOLA3Q53S33 107 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 TMCO4Q5TGY1 634 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 E4F1Q66K89 784 aaPredicted RBP11.59□□□□□ -0.55
IRF1-204ENST00000439555 CYP4V2Q6ZWL3 525 aaPredicted RBP11.59□□□□□ -0.55
IRF1-204ENST00000439555 HIC2Q96JB3 615 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 SNRNP25Q9BV90 132 aaKnown RBP11.59□□□□□ -0.55
IRF1-204ENST00000439555 SLC39A8Q9C0K1 460 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 SUV39H2Q9H5I1 410 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 DHX35Q9H5Z1 703 aaKnown RBP11.59□□□□□ -0.55
IRF1-204ENST00000439555 CNOT8Q9UFF9 292 aaKnown RBP11.59□□□□□ -0.55
IRF1-204ENST00000439555 IPO11Q9UI26 975 aaKnown RBP11.59□□□□□ -0.55
IRF1-204ENST00000439555 SALL4Q9UJQ4 1053 aa11.59□□□□□ -0.55
IRF1-204ENST00000439555 NYNRINQ9P2P1 1898 aaKnown RBP11.59□□□□□ -0.55
IRF1-204ENST00000439555 COL12A1Q99715 3063 aa11.58□□□□□ -0.55
IRF1-204ENST00000439555 TMEM110-MUSTN1A8MSY1 372 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 J3KR12 359 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 K7ESM1 405 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 DAPK3O43293 454 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 LRCH4O75427 683 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 NTRK1P04629 796 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 ERCC2P18074 760 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 XPAP23025 273 aaPredicted RBP11.58□□□□□ -0.56
IRF1-204ENST00000439555 PEX5P50542 639 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 PAPOLAP51003 745 aaKnown RBP11.58□□□□□ -0.56
IRF1-204ENST00000439555 DAB2P98082 770 aa11.58□□□□□ -0.56
IRF1-204ENST00000439555 INSM1Q01101 510 aaPredicted RBP11.58□□□□□ -0.56
IRF1-204ENST00000439555 PDE1CQ14123 709 aaPredicted RBP11.58□□□□□ -0.56
IRF1-204ENST00000439555 PIGHQ14442 188 aaPredicted RBP11.58□□□□□ -0.56
IRF1-204ENST00000439555 CA9Q16790 459 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms