RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 HDAC8Q9BY41 377 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 ZYG11BQ9C0D3 744 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 GOLPH3Q9H4A6 298 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 UCKL1Q9NWZ5 548 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 IPO11Q9UI26 975 aaKnown RBP9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 TMEM59LQ9UK28 342 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 CAPN6Q9Y6Q1 641 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 FLNBO75369 2602 aaKnown RBP9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 BPTFQ12830 3046 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 NYNRINQ9P2P1 1898 aaKnown RBP9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 IGLV3-10A0A075B6K4 115 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 A0A087WV48 116 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 RNF103O00237 685 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 NEMP1O14524 444 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 RRP8O43159 456 aaKnown RBP9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 ZMPSTE24O75844 475 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 FTCDO95954 541 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 MT-CO3P00414 261 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 ALPPL2P10696 532 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 TNNT1P13805 278 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 ACP1P24666 158 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 ITPKBP27987 946 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 SERPINH1P50454 418 aaKnown RBP9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 NEK3P51956 506 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 ETF1P62495 437 aaKnown RBP9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 E2F1Q01094 437 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 OGDHQ02218 1023 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 GNA12Q03113 381 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 SGCGQ13326 291 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 CDO1Q16878 200 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 ARL13BQ3SXY8 428 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 TRNP1Q6NT89 227 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 SYT10Q6XYQ8 523 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 ZNF783Q6ZMS7 281 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 KDM7AQ6ZMT4 941 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 PCDH20Q8N6Y1 951 aaKnown RBP9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 LRRC57Q8N9N7 239 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 TMEM145Q8NBT3 493 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 RXFP2Q8WXD0 754 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 CRELD1Q96HD1 420 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 FEM1CQ96JP0 617 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 WDR24Q96S15 920 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 SLC17A9Q9BYT1 436 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 CEP44Q9C0F1 390 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 NRSN2Q9GZP1 204 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 ZDHHC6Q9H6R6 413 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 CAAP1Q9H8G2 361 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 DNAJC28Q9NX36 388 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 IP6K2Q9UHH9 426 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 DNAI1Q9UI46 699 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 ZFR2Q9UPR6 939 aaKnown RBP9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 CLCA2Q9UQC9 943 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 FCF1Q9Y324 198 aaKnown RBP9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 HYOU1Q9Y4L1 999 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 ALG6Q9Y672 507 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 WASF2Q9Y6W5 498 aa9.34□□□□□ -0.91
AC011228.1-201ENST00000439027 COL5A1P20908 1838 aaPredicted RBP9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 MYLKQ15746 1914 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 C2CD4BA6NLJ0 364 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 A6NNZ2 444 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 RNF223E7ERA6 249 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 KIF2AO00139 706 aaPredicted RBP9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 TLX3O43711 291 aaPredicted RBP9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 ZNF821O75541 412 aaPredicted RBP9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 PIAS2O75928 621 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 PROSCO94903 275 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 PAK4O96013 591 aaPredicted RBP9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 MYF5P13349 255 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 ADRB3P13945 408 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 GPD1P21695 349 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 PSMA2P25787 234 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 ITGB7P26010 798 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 CASQ1P31415 396 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 SDC4P31431 198 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 L1CAMP32004 1257 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 ADRA1BP35368 520 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 ACVRL1P37023 503 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 EIF2S3P41091 472 aaKnown RBP9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 CCNHP51946 323 aaPredicted RBP9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 RPS21P63220 83 aaKnown RBP9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 INSM1Q01101 510 aaPredicted RBP9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 C15orf59Q2T9L4 293 aaPredicted RBP9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 RAB6CQ53S08 254 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 KIAA1161Q6NSJ0 714 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 C11orf63Q6NUN7 778 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 LEKR1Q6ZMV7 388 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 GCNT7Q6ZNI0 430 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 PEX26Q7Z412 305 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 SLFN11Q7Z7L1 901 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 ZNF354CQ86Y25 554 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 CPNE8Q86YQ8 564 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 DCP2Q8IU60 420 aaKnown RBP9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 SYCE1Q8N0S2 351 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 OR6K2Q8NGY2 324 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 OR4C6Q8NH72 309 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 ZNF592Q92610 1267 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 TM6SF2Q9BZW4 377 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 RAB6CQ9H0N0 254 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 OSBPL2Q9H1P3 480 aa9.33□□□□□ -0.92
AC011228.1-201ENST00000439027 PPARGC1AQ9UBK2 798 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms