RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 OLA1Q9NTK5 396 aaKnown RBP11.23□□□□□ -0.61
RTN4-211ENST00000438462 PDP2Q9P2J9 529 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 ST6GALNAC2Q9UJ37 374 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 SH3BGRL2Q9UJC5 107 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 ITM2BQ9Y287 266 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
RTN4-211ENST00000438462 PCDHGC4Q9Y5F7 938 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 TGP01266 2768 aa11.23□□□□□ -0.61
RTN4-211ENST00000438462 AP1G1O43747 822 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 JRKO75564 520 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 TNFP01375 233 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 IGHDP01880 384 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 CCNYL3P0C7X3 344 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 TRIM49P0CI25 452 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 TRIM49CP0CI26 452 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 GPR3P46089 330 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 PPM1FP49593 454 aaPredicted RBP11.22□□□□□ -0.61
RTN4-211ENST00000438462 MYL6P60660 151 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 KRT83P78385 493 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 KCNA1Q09470 495 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 BIRC2Q13490 618 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 BMP2KLQ5H9B9 411 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 ARHGAP22Q7Z5H3 698 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 WDR49Q8IV35 697 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 OR2A12Q8NGT7 310 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 CCL4L1Q8NHW4 92 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 CBWD1Q9BRT8 395 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 RAB34Q9BZG1 259 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 NUCKS1Q9H1E3 243 aaKnown RBP11.22□□□□□ -0.61
RTN4-211ENST00000438462 RWDD1Q9H446 243 aaPredicted RBP11.22□□□□□ -0.61
RTN4-211ENST00000438462 PCIF1Q9H4Z3 704 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 LHX9Q9NQ69 397 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 SIDT1Q9NXL6 827 aaKnown RBP11.22□□□□□ -0.61
RTN4-211ENST00000438462 LNPEPQ9UIQ6 1025 aa11.22□□□□□ -0.61
RTN4-211ENST00000438462 ANKRD36A6QL64 1941 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 MASP2O00187 686 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 TOR1BO14657 336 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 NDUFA10O95299 355 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 IDEP14735 1019 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 AGAP20933 346 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 HTR1BP28222 390 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 PTPN4P29074 926 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 ORC2Q13416 577 aaPredicted RBP11.21□□□□□ -0.61
RTN4-211ENST00000438462 SQSTM1Q13501 440 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 NFATC4Q14934 902 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 IRF4Q15306 451 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 ARSIQ5FYB1 569 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 MS4A13Q5J8X5 152 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 FOXR2Q6PJQ5 311 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 IGFL3Q6UXB1 125 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 GPBP1Q86WP2 473 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 C17orf82Q86X59 251 aaPredicted RBP11.21□□□□□ -0.61
RTN4-211ENST00000438462 SH2D3CQ8N5H7 860 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 TP53I13Q8NBR0 393 aaPredicted RBP11.21□□□□□ -0.61
RTN4-211ENST00000438462 RNF139Q8WU17 664 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 EDEM1Q92611 657 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 ELMO3Q96BJ8 720 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 CCDC114Q96M63 670 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 BRD8Q9H0E9 1235 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 XYLT2Q9H1B5 865 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 ST6GALNAC4Q9H4F1 302 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 PADI1Q9ULC6 663 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 NOVA2Q9UNW9 492 aaKnown RBP11.21□□□□□ -0.61
RTN4-211ENST00000438462 PLEKHM1Q9Y4G2 1056 aa11.21□□□□□ -0.61
RTN4-211ENST00000438462 A0A0U1RQS6 177 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 A0A1W2PQJ5 194 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 TSPAN6O43657 245 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 TBCAO75347 108 aaKnown RBP11.2□□□□□ -0.62
RTN4-211ENST00000438462 LEFTY1O75610 366 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 ECEL1O95672 775 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 STAU1O95793 577 aaKnown RBP11.2□□□□□ -0.62
RTN4-211ENST00000438462 IGLV3-27P01718 113 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 GARTP22102 1010 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 PEX5P50542 639 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 OTUD4Q01804 1114 aaKnown RBP11.2□□□□□ -0.62
RTN4-211ENST00000438462 LAMB3Q13751 1172 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 LONRF1Q17RB8 773 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 EFHC1Q5JVL4 640 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 ANKRD40Q6AI12 368 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 RASGRP3Q8IV61 690 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 FAM186BQ8IYM0 893 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 CRYBG2Q8N1P7 616 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 GPD1LQ8N335 351 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 C4orf32Q8N8J7 132 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 ADAMTS17Q8TE56 1095 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 ZDHHC1Q8WTX9 485 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 TMEM168Q9H0V1 697 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 LIME1Q9H400 295 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 ZDHHC6Q9H6R6 413 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 ZNF395Q9H8N7 513 aaPredicted RBP11.2□□□□□ -0.62
RTN4-211ENST00000438462 ARHGEF38Q9NXL2 777 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 IL36AQ9UHA7 158 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 PLEKHA6Q9Y2H5 1048 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 CSAG2Q9Y5P2 127 aa11.2□□□□□ -0.62
RTN4-211ENST00000438462 K7ELQ4 463 aaPredicted RBP11.19□□□□□ -0.62
RTN4-211ENST00000438462 NEMP1O14524 444 aa11.19□□□□□ -0.62
RTN4-211ENST00000438462 EIF5BO60841 1220 aaKnown RBP11.19□□□□□ -0.62
RTN4-211ENST00000438462 CDC45O75419 566 aa11.19□□□□□ -0.62
RTN4-211ENST00000438462 PLEKP08567 350 aaPredicted RBP11.19□□□□□ -0.62
RTN4-211ENST00000438462 LPOP22079 712 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms