RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ARHGEF19Q8IW93 802 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 KIF2BQ8N4N8 673 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 GAL3ST3Q96A11 431 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 MCRS1Q96EZ8 462 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 MOCS1Q9NZB8 636 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 FAM25EA8MYX2 175 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 TRDMT1O14717 391 aaKnown RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 EIF2S3P41091 472 aaKnown RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 MANFP55145 182 aaKnown RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 RAPSNQ13702 412 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 N4BP2L1Q5TBK1 243 aaPredicted RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 TXNDC11Q6PKC3 985 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 SH2D3CQ8N5H7 860 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 TMEM27Q9HBJ8 222 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 MRPS7Q9Y2R9 242 aaKnown RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 GOLGA4Q13439 2230 aaKnown RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 WDR27A2RRH5 827 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 MRASO14807 208 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 IDSP22304 550 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 AVPR1BP47901 424 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 CBX3Q13185 183 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 LARS2Q15031 903 aaKnown RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 TTI2Q6NXR4 508 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 GJB7Q6PEY0 223 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 APTXQ7Z2E3 356 aaKnown RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 DEFB107AQ8IZN7 70 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 DEFB106AQ8N104 65 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 CDCA5Q96FF9 252 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 DHRS1Q96LJ7 313 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 PRICKLE1Q96MT3 831 aaPredicted RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 PCDH12Q9NPG4 1184 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 NKIRAS2Q9NYR9 191 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 LACTBL1A8MY62 500 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 ULK1O75385 1050 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 ARP10275 920 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 HNF4AP41235 474 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 MECP2P51608 486 aaKnown RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 DCLRE1AQ6PJP8 1040 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 CST11Q9H112 138 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 TOR4AQ9NXH8 423 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 DAPK2Q9UIK4 370 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 PTGES3LE9PB15 166 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 AGXTP21549 392 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 CMPK1P30085 196 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 RPS6KA3P51812 740 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 CDK16Q00536 496 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 GIT2Q14161 759 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 FIP1L1Q6UN15 594 aaKnown RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 GJD3Q8N144 294 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 DHRSXQ8N5I4 330 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 FAM129BQ96TA1 746 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 SSR2P43308 183 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 IDH2P48735 452 aaKnown RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 FKBP1BP68106 108 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 MAPKAPK3Q16644 382 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 PCID2Q5JVF3 399 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 CHADLQ6NUI6 762 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 UNC93AQ86WB7 457 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 GALNT13Q8IUC8 556 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 RBFAQ8N0V3 343 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 EMC1Q8N766 993 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 COX4I2Q96KJ9 171 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 PARP6Q2NL67 630 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 SCUBE3Q8IX30 993 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 MAML3Q96JK9 1138 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 SPATA31A5Q5VU36 1347 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 SPATA31A7Q8IWB4 1347 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 HAT1O14929 419 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 FOXN1O15353 648 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 PLIN3O60664 434 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 OTCP00480 354 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 SELENOVP59797 346 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 PLGLB1Q02325 96 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 RAP1GAP2Q684P5 730 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 NUP54Q7Z3B4 507 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 HELQQ8TDG4 1101 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CLP1Q92989 425 aaKnown RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 WNT8BQ93098 351 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CRISPLD1Q9H336 500 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CCDC167Q9P0B6 97 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 COG5Q9UP83 839 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 SAMD4AQ9UPU9 718 aaKnown RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 PEX12O00623 359 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 TRIM3O75382 744 aaPredicted RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 PIM1P11309 404 aaPredicted RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CDH3P22223 829 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CD86P42081 329 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 TROAPQ12815 778 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 ILF3Q12906 894 aaKnown RBP eCLIP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 PFKFB4Q16877 469 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CXCL17Q6UXB2 119 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 KYAT3Q6YP21 454 aaKnown RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 TCAIMQ8N3R3 496 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 HIPK3Q9H422 1215 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 IKZF3Q9UKT9 509 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 H0YJX3 145 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CLEC3AO75596 197 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 NOL4O94818 638 aa11.25□□□□□ -0.61
SCN4A-201ENST00000435607 ATP5A1P25705 553 aaKnown RBP11.25□□□□□ -0.61
SCN4A-201ENST00000435607 CAPGP40121 348 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms