RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ECSITQ9BQ95 431 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 NT5MQ9NPB1 228 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 GMIPQ9P107 970 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 TTC3P53804 2025 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 HAPLN1P10915 354 aaPredicted RBP18.74■□□□□ 0.59
CLK1-205ENST00000434813 CKBP12277 381 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 MAGEA11P43364 429 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 CDC16Q13042 620 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 MARC1Q5VT66 337 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 CNSTQ6PJW8 725 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 C16orf89Q6UX73 402 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 SLC24A5Q71RS6 500 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 RTN4RL1Q86UN2 441 aaPredicted RBP18.74■□□□□ 0.59
CLK1-205ENST00000434813 SNX32Q86XE0 403 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 TEX26Q8N6G2 289 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 KDM1BQ8NB78 822 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 SLC26A7Q8TE54 656 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 SPDL1Q96EA4 605 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 PPP1R36Q96LQ0 422 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 SP110Q9HB58 689 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 IL37Q9NZH6 218 aa18.74■□□□□ 0.59
CLK1-205ENST00000434813 J3KR12 359 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 JUNP05412 331 aaKnown RBP18.73■□□□□ 0.59
CLK1-205ENST00000434813 MMP2P08253 660 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 CD86P42081 329 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 NUDT2P50583 147 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 USP46P62068 366 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 SLC10A7Q0GE19 358 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 MSLNQ13421 630 aaPredicted RBP18.73■□□□□ 0.59
CLK1-205ENST00000434813 SLC14A2Q15849 920 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 ALFQ53S48 1182 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 TECRLQ5HYJ1 363 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 TCHHL1Q5QJ38 904 aaPredicted RBP18.73■□□□□ 0.59
CLK1-205ENST00000434813 TMEM154Q6P9G4 183 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 CCNYL1Q8N7R7 359 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 OR13J1Q8NGT2 312 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 MAELQ96JY0 434 aaKnown RBP18.73■□□□□ 0.59
CLK1-205ENST00000434813 OLFM1Q99784 485 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 POMKQ9H5K3 350 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 SUFUQ9UMX1 484 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 PCDHB5Q9Y5E4 795 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 FAM92AA1XBS5 289 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 DPPA5A6NC42 116 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 LINGO3P0C6S8 592 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 PAX7P23759 505 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 OR1G1P47890 313 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 PSMD5Q16401 504 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 FAM83EQ2M2I3 478 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 PPM1LQ5SGD2 360 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 ATP6V0D2Q8N8Y2 350 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 LINC01599Q8WXQ3 324 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 TADA1Q96BN2 335 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 PABPC5Q96DU9 382 aaKnown RBP18.73■□□□□ 0.59
CLK1-205ENST00000434813 CCDC126Q96EE4 140 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 TSPAN17Q96FV3 270 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 BTN2A3PQ96KV6 586 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 KLHL5Q96PQ7 755 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 UNKQ9C0B0 810 aaKnown RBP18.73■□□□□ 0.59
CLK1-205ENST00000434813 VCXQ9H320 206 aa18.73■□□□□ 0.59
CLK1-205ENST00000434813 BPTFQ12830 3046 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 TRPC5OSA6NMA1 111 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 SYN3O14994 580 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 CNTN5O94779 1100 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 MAXP61244 160 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 PFKPQ01813 784 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 SATB1Q01826 763 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 CYLC2Q14093 348 aaPredicted RBP18.72■□□□□ 0.59
CLK1-205ENST00000434813 TRIP4Q15650 581 aaPredicted RBP18.72■□□□□ 0.59
CLK1-205ENST00000434813 PDCD2Q16342 344 aaPredicted RBP18.72■□□□□ 0.59
CLK1-205ENST00000434813 VARS2Q5ST30 1063 aaKnown RBP18.72■□□□□ 0.59
CLK1-205ENST00000434813 RNF111Q6ZNA4 994 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 TRIM67Q6ZTA4 783 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 KYQ8NBH2 561 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 GATA6Q92908 595 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 NR1H4Q96RI1 486 aaPredicted RBP18.72■□□□□ 0.59
CLK1-205ENST00000434813 NDNQ99608 321 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 ZBTB26Q9HCK0 441 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 PRG3Q9Y2Y8 225 aaPredicted RBP18.72■□□□□ 0.59
CLK1-205ENST00000434813 TRIM17Q9Y577 477 aa18.72■□□□□ 0.59
CLK1-205ENST00000434813 MROH6A6NGR9 719 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 AIM2O14862 343 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 SLC7A4O43246 635 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 CD1EP15812 388 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 DSC2Q02487 901 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 ITKQ08881 620 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 EFEMP1Q12805 493 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 CSHL1Q14406 222 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 ZNF789Q5FWF6 425 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 AGAP9Q5VTM2 703 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 ZNF280DQ6N043 979 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 TRAF7Q6Q0C0 670 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 KBTBD6Q86V97 674 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 CILP2Q8IUL8 1156 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 PSMG2Q969U7 264 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 CATSPER2Q96P56 530 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 SERPINI1Q99574 410 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 VCX3BQ9H321 246 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 ZDHHC7Q9NXF8 308 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 STK39Q9UEW8 545 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 VPS28Q9UK41 221 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms