RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 GABRB3P28472 473 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 IRS1P35568 1242 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 LEPRP48357 1165 aaKnown RBP12.94□□□□□ -0.34
DDX56-204ENST00000431640 PPP3CCP48454 512 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 CDH4P55283 916 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 IRF9Q00978 393 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 CTBP1Q13363 440 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 SEPT6Q14141 434 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 DLG2Q15700 870 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 CFAP157Q5JU67 520 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 RABGAP1LQ5R372 815 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 HECTD3Q5T447 861 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 LIPMQ5VYY2 423 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 METTL21CQ5VZV1 264 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 KIAA1841Q6NSI8 718 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 SLC25A41Q8N5S1 370 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 FAM13CQ8NE31 585 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 ARRDC2Q8TBH0 407 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 SPPL3Q8TCT6 385 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 AGAP11Q8TF27 550 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 MCUR1Q96AQ8 359 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 PLD4Q96BZ4 506 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 C1QTNF1Q9BXJ1 281 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 CADM1Q9BY67 442 aaKnown RBP12.94□□□□□ -0.34
DDX56-204ENST00000431640 ACE2Q9BYF1 805 aaPredicted RBP12.94□□□□□ -0.34
DDX56-204ENST00000431640 NACA2Q9H009 215 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 ILKAPQ9H0C8 392 aaPredicted RBP12.94□□□□□ -0.34
DDX56-204ENST00000431640 C1orf21Q9H246 121 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 CCSER2Q9H7U1 834 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 TAS2R1Q9NYW7 299 aa12.94□□□□□ -0.34
DDX56-204ENST00000431640 AFF4Q9UHB7 1163 aaKnown RBP12.94□□□□□ -0.34
DDX56-204ENST00000431640 CCDC78A2IDD5 438 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 B2RBV5 119 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 SLCO1B7G3V0H7 640 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 MMP2P08253 660 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 ATF6P18850 670 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 AOC1P19801 751 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 HLA-DPA1P20036 260 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 CES1P23141 567 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 ARNTP27540 789 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 OR1D2P34982 312 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 SLC1A2P43004 574 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 CLCN5P51795 746 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 ERVK-21P61565 698 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 DSC2Q02487 901 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 ZNF235Q14590 738 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 PREPLQ4J6C6 727 aaPredicted RBP12.93□□□□□ -0.34
DDX56-204ENST00000431640 DNAL1Q4LDG9 190 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 TPGS2Q68CL5 300 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 KDELC2Q7Z4H8 507 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 DENND6AQ8IWF6 608 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 TEX9Q8N6V9 391 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 STYXQ8WUJ0 223 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 PDCD6IPQ8WUM4 868 aaKnown RBP12.93□□□□□ -0.34
DDX56-204ENST00000431640 POF1BQ8WVV4 589 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 STON2Q8WXE9 905 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 IFT43Q96FT9 208 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 FEM1CQ96JP0 617 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 SCYL1Q96KG9 808 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 KLHL5Q96PQ7 755 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 DDX50Q9BQ39 737 aaKnown RBP12.93□□□□□ -0.34
DDX56-204ENST00000431640 TACO1Q9BSH4 297 aaKnown RBP12.93□□□□□ -0.34
DDX56-204ENST00000431640 DRC3Q9H069 523 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 CDH19Q9H159 772 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 ATXN3LQ9H3M9 355 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 PNPOQ9NVS9 261 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 NOP53Q9NZM5 478 aaKnown RBP12.93□□□□□ -0.34
DDX56-204ENST00000431640 SLC2A6Q9UGQ3 507 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 RIMKLBQ9ULI2 386 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.93□□□□□ -0.34
DDX56-204ENST00000431640 RAP2CQ9Y3L5 183 aa12.93□□□□□ -0.34
DDX56-204ENST00000431640 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.92□□□□□ -0.34
DDX56-204ENST00000431640 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.92□□□□□ -0.34
DDX56-204ENST00000431640 MROH6A6NGR9 719 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 HIDE1A8MVS5 230 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 MAGEC1O60732 1142 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 CLDN11O75508 207 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 FGF1P05230 155 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 URODP06132 367 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 SLC35E2BP0CK96 405 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 CTSAP10619 480 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 HOXB8P17481 243 aaPredicted RBP12.92□□□□□ -0.34
DDX56-204ENST00000431640 SAT1P21673 171 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 SERPINB5P36952 375 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 CHRNA4P43681 627 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 ABCG1P45844 678 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 IDH3AP50213 366 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 ALDH18A1P54886 795 aaKnown RBP12.92□□□□□ -0.34
DDX56-204ENST00000431640 MAXP61244 160 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 MPP1Q00013 466 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 MSLNQ13421 630 aaPredicted RBP12.92□□□□□ -0.34
DDX56-204ENST00000431640 RFTN1Q14699 578 aaPredicted RBP12.92□□□□□ -0.34
DDX56-204ENST00000431640 FSCBQ5H9T9 825 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 ZNF470Q6ECI4 717 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 NADSYN1Q6IA69 706 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 RINLQ6ZS11 566 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 TTC7BQ86TV6 843 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 SLC41A1Q8IVJ1 513 aa12.92□□□□□ -0.34
DDX56-204ENST00000431640 ACVR1CQ8NER5 493 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms