RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TNFRSF6BO95407 300 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 HNRNPA1P09651 372 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 XRCC1P18887 633 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CDH5P33151 784 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 VAMP2P63027 116 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 DLG4P78352 724 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 FAM69CQ0P6D2 419 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PTK6Q13882 451 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 RRP1BQ14684 758 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 GRM7Q14831 915 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 EMC2Q15006 297 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 TBCEQ15813 527 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF311Q5JNZ3 666 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 KRT40Q6A162 431 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 FDX2Q6P4F2 183 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 TTC33Q6PID6 262 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CFAP77Q6ZQR2 320 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 STOX1Q6ZVD7 989 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 POLNQ7Z5Q5 900 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 DAGLBQ8NCG7 672 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 RAB3IPQ96QF0 476 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 BPIFA3Q9BQP9 254 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 TRIM56Q9BRZ2 755 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 C6orf62Q9GZU0 229 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF700Q9H0M5 742 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 DDX47Q9H0S4 455 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 PCDH9Q9HC56 1237 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 NPHS2Q9NP85 383 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 NCDNQ9UBB6 729 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 IPO11Q9UI26 975 aaKnown RBP5.41□□□□□ -1.54
PTPN4-203ENST00000430976 CA5BQ9Y2D0 317 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 NPFFR2Q9Y5X5 522 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 ERICH3Q5RHP9 1530 aa5.41□□□□□ -1.54
PTPN4-203ENST00000430976 SCAPERQ9BY12 1400 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 GSTA4O15217 222 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 SLC16A6O15403 523 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 ADAP1O75689 374 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 ALX3O95076 343 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 HSD3B1P14060 373 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 TIE1P35590 1138 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 GRK6P43250 576 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 ADKP55263 362 aaKnown RBP5.4□□□□□ -1.54
PTPN4-203ENST00000430976 HTD2P86397 168 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 BNC1Q01954 994 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 KLHL22Q53GT1 634 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 OXLD1Q5BKU9 147 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 ARMCX5Q6P1M9 558 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 DENND1BQ6P3S1 775 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 CRYBG2Q8N1P7 616 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 PYROXD1Q8WU10 500 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 CHTF18Q8WVB6 975 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 HSD17B8Q92506 261 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 C10orf90Q96M02 699 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 QRFPRQ96P65 431 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 NUDT9Q9BW91 350 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 REXO4Q9GZR2 422 aaKnown RBP5.4□□□□□ -1.54
PTPN4-203ENST00000430976 KCNN2Q9H2S1 579 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 NARFLQ9H6Q4 476 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 DNAJC28Q9NX36 388 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 STRAPQ9Y3F4 350 aaKnown RBP5.4□□□□□ -1.54
PTPN4-203ENST00000430976 ALG5Q9Y673 324 aa5.4□□□□□ -1.54
PTPN4-203ENST00000430976 GMNCA6NCL1 334 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 O00370 1275 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 GPAA1O43292 621 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 PLA2G6O60733 806 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 AOC2O75106 756 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 FAM107AO95990 144 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 OPN1MWP04001 364 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 OPN1MW2P0DN77 364 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 OPN1MW3P0DN78 364 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 BUD31P41223 144 aaPredicted RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 RBM34P42696 430 aaKnown RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 CHRNEQ04844 493 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 PRKAA1Q13131 559 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 ZNHIT3Q15649 155 aaPredicted RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 CHRNA6Q15825 494 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 ERFEQ4G0M1 354 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 COLEC12Q5KU26 742 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 KCTD11Q693B1 232 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 TCEAL6Q6IPX3 200 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 TRAT1Q6PIZ9 186 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 KIAA1324Q6UXG2 1013 aaKnown RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 RTL4Q6ZR62 310 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 TOM1L2Q6ZVM7 507 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 USP51Q70EK9 711 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 NEK8Q86SG6 692 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 RNF180Q86T96 592 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 MARVELD2Q8N4S9 558 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 TRMT10AQ8TBZ6 339 aaKnown RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 PCNPQ8WW12 178 aaKnown RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 CCNL2Q96S94 520 aaPredicted RBP5.4□□□□□ -1.55
PTPN4-203ENST00000430976 TBC1D13Q9NVG8 400 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 UVRAGQ9P2Y5 699 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 CDY2AQ9Y6F7 541 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 PCDH11XQ9BZA7 1347 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 PCDH11YQ9BZA8 1340 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 MAP3K1Q13233 1512 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 FCHO1O14526 889 aa5.4□□□□□ -1.55
PTPN4-203ENST00000430976 PI15O43692 258 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms