RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 OR13H1Q8NG92 308 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 BAHD1Q8TBE0 780 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-207ENST00000430858 SAP25Q8TEE9 199 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 ECHDC3Q96DC8 303 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 IFT43Q96FT9 208 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 BMFQ96LC9 184 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 PANX2Q96RD6 677 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 NUDCD1Q96RS6 583 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 MGME1Q9BQP7 344 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 LUC7LQ9NQ29 371 aaKnown RBP9.91□□□□□ -0.82
HDAC6-207ENST00000430858 KLHL11Q9NVR0 708 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 GGT7Q9UJ14 662 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 APOBEC2Q9Y235 224 aaKnown RBP9.91□□□□□ -0.82
HDAC6-207ENST00000430858 LAMA1P25391 3075 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 PLXNA2O75051 1894 aa9.91□□□□□ -0.82
HDAC6-207ENST00000430858 LRRD1A4D1F6 860 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 CFAP69A5D8W1 941 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 TRAFD1O14545 582 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-207ENST00000430858 RIOK3O14730 519 aaKnown RBP9.9□□□□□ -0.82
HDAC6-207ENST00000430858 MUSKO15146 869 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 RAD51BO15315 384 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 TNFSF14O43557 240 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 MFSD11O43934 449 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 MMP20O60882 483 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 SOCS5O75159 536 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 CR2P20023 1033 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 MX2P20592 715 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 FECHP22830 423 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 MMP13P45452 471 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 HADHBP55084 474 aaKnown RBP9.9□□□□□ -0.82
HDAC6-207ENST00000430858 FOXC1Q12948 553 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 IFI16Q16666 785 aaKnown RBP9.9□□□□□ -0.82
HDAC6-207ENST00000430858 LRRC73Q5JTD7 316 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 Q6ZSR6 202 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 PTAR1Q7Z6K3 402 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-207ENST00000430858 GATAD2AQ86YP4 633 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 TMTC1Q8IUR5 882 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 RHOT1Q8IXI2 618 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 TEX26Q8N6G2 289 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 PAF1Q8N7H5 531 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 SPOCK2Q92563 424 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 RAPGEF5Q92565 580 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 FATE1Q969F0 183 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 CENPTQ96BT3 561 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 TSGA13Q96PP4 275 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 RNF157Q96PX1 679 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 KLF6Q99612 283 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-207ENST00000430858 PCDH12Q9NPG4 1184 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 SCUBE2Q9NQ36 999 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 GPR27Q9NS67 375 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 HAUS2Q9NVX0 235 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 DDX56Q9NY93 547 aaKnown RBP9.9□□□□□ -0.82
HDAC6-207ENST00000430858 BTBD3Q9Y2F9 522 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 ATP8A1Q9Y2Q0 1164 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 PCDHA13Q9Y5I0 950 aa9.9□□□□□ -0.82
HDAC6-207ENST00000430858 PCNX2A6NKB5 2137 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 SPTBN2O15020 2390 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 A0A0A6YYK5 440 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-207ENST00000430858 POM121BA6NF01 834 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 TOR1BO14657 336 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 MATN3O15232 486 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 HTRA2O43464 458 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-207ENST00000430858 IPO7O95373 1038 aaKnown RBP9.89□□□□□ -0.83
HDAC6-207ENST00000430858 FTH1P19P0C7X4 201 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 ZFXP17010 805 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-207ENST00000430858 ITIH2P19823 946 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 COMTP21964 271 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 CCNCP24863 283 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 NFKBIAP25963 317 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 MMP12P39900 470 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 NOP2P46087 812 aaKnown RBP9.89□□□□□ -0.83
HDAC6-207ENST00000430858 PFN3P60673 137 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 BNIP3Q12983 259 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 ODF2Q5BJF6 829 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 ZSWIM9Q86XI8 627 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 SLC22A18ASQ8N1D0 253 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 PGBD5Q8N414 524 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 PQLC3Q8N755 202 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-207ENST00000430858 MAML1Q92585 1016 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 HDAC11Q96DB2 347 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 ZNF830Q96NB3 372 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-207ENST00000430858 WRAP53Q9BUR4 548 aaKnown RBP9.89□□□□□ -0.83
HDAC6-207ENST00000430858 MAK16Q9BXY0 300 aaKnown RBP9.89□□□□□ -0.83
HDAC6-207ENST00000430858 FTSJ1Q9UET6 329 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 AMACRQ9UHK6 382 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 WASF3Q9UPY6 502 aa9.89□□□□□ -0.83
HDAC6-207ENST00000430858 KNL1Q8NG31 2342 aa9.88□□□□□ -0.83
HDAC6-207ENST00000430858 NCOR2Q9Y618 2525 aa9.88□□□□□ -0.83
HDAC6-207ENST00000430858 SPTY2D1-AS1A0A0U1RR47 76 aa9.88□□□□□ -0.83
HDAC6-207ENST00000430858 SOWAHDA6NJG2 315 aa9.88□□□□□ -0.83
HDAC6-207ENST00000430858 C3orf70A6NLC5 250 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-207ENST00000430858 APOL1O14791 398 aa9.88□□□□□ -0.83
HDAC6-207ENST00000430858 PSTPIP1O43586 416 aa9.88□□□□□ -0.83
HDAC6-207ENST00000430858 SPOPO43791 374 aa9.88□□□□□ -0.83
HDAC6-207ENST00000430858 NEBLO76041 1014 aa9.88□□□□□ -0.83
HDAC6-207ENST00000430858 NDUFA10O95299 355 aa9.88□□□□□ -0.83
HDAC6-207ENST00000430858 LDOC1O95751 146 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-207ENST00000430858 KRT1P04264 644 aa9.88□□□□□ -0.83
HDAC6-207ENST00000430858 C6P13671 934 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms