RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ERN2Q76MJ5 926 aaKnown RBP11.1□□□□□ -0.63
CHD4-202ENST00000430771 PARS2Q7L3T8 475 aaKnown RBP11.1□□□□□ -0.63
CHD4-202ENST00000430771 PCGF5Q86SE9 256 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 PRUNE1Q86TP1 453 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 LINC00523Q86TU6 105 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 PRPF39Q86UA1 669 aaKnown RBP11.1□□□□□ -0.63
CHD4-202ENST00000430771 RASSF3Q86WH2 238 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 CAMK1DQ8IU85 385 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 C1orf210Q8IVY1 113 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 KLHDC8BQ8IXV7 354 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 DTWD2Q8NBA8 298 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 BBOF1Q8ND07 529 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 MDGA1Q8NFP4 955 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 SPATA22Q8NHS9 363 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 GANCQ8TET4 914 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 SPOCK2Q92563 424 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 RAB7BQ96AH8 199 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 TADA1Q96BN2 335 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 ECHDC3Q96DC8 303 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 SPACA7Q96KW9 195 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 OMDQ99983 421 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 GORASP1Q9BQQ3 440 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 TRIM51Q9BSJ1 452 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 MLPHQ9BV36 600 aaPredicted RBP11.1□□□□□ -0.63
CHD4-202ENST00000430771 ADGRE3Q9BY15 652 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 ETNK1Q9HBU6 452 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 FZD4Q9ULV1 537 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 RPL26L1Q9UNX3 145 aaKnown RBP11.1□□□□□ -0.63
CHD4-202ENST00000430771 NCKAP1Q9Y2A7 1128 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 UTP11Q9Y3A2 253 aaKnown RBP11.1□□□□□ -0.63
CHD4-202ENST00000430771 NEU2Q9Y3R4 380 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 CCDC163A0A0D9SF12 145 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 A0A1W2PP55 124 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 C16orf96A6NNT2 1141 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 EFCAB8A8MWE9 144 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 K7ESF4 209 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 SMAPO00193 183 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 DNALI1O14645 258 aaPredicted RBP11.09□□□□□ -0.63
CHD4-202ENST00000430771 GPR37L1O60883 481 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 RNASEH2AO75792 299 aaKnown RBP11.09□□□□□ -0.63
CHD4-202ENST00000430771 NDST3O95803 873 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 EPOP01588 193 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 APRTP07741 180 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 CYP2A6P11509 494 aaPredicted RBP11.09□□□□□ -0.63
CHD4-202ENST00000430771 ADRB3P13945 408 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 AVPR2P30518 371 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 HOXA6P31267 233 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 ADCY8P40145 1251 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 WNT3AP56704 352 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 SARNPP82979 210 aaKnown RBP11.09□□□□□ -0.63
CHD4-202ENST00000430771 ELP6Q0PNE2 266 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 POM121L1PQ3SYA9 428 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 GLE1Q53GS7 698 aaKnown RBP11.09□□□□□ -0.63
CHD4-202ENST00000430771 ERAP2Q6P179 960 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 FBXL19Q6PCT2 694 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 USP45Q70EL2 814 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 HDDC3Q8N4P3 179 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 TAB3Q8N5C8 712 aaPredicted RBP11.09□□□□□ -0.63
CHD4-202ENST00000430771 LPCAT1Q8NF37 534 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 ARRDC3Q96B67 414 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 SNF8Q96H20 258 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 MRGPRX2Q96LB1 330 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 SRPK1Q96SB4 655 aaKnown RBP11.09□□□□□ -0.63
CHD4-202ENST00000430771 TBL1YQ9BQ87 522 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 FICDQ9BVA6 458 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 HDAC8Q9BY41 377 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 C2orf42Q9NWW7 574 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 FBXL12Q9NXK8 326 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 UBP1Q9NZI7 540 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 EBF1Q9UH73 591 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 FBXO4Q9UKT5 387 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 SARDHQ9UL12 918 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 PHTF1Q9UMS5 762 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 PCDHB9Q9Y5E1 797 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 PCDHGC4Q9Y5F7 938 aa11.09□□□□□ -0.63
CHD4-202ENST00000430771 CAPN8A6NHC0 703 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 AP3B1O00203 1094 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 AXIN1O15169 862 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 FZD6O60353 706 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 HEXIM1O94992 359 aaKnown RBP11.08□□□□□ -0.64
CHD4-202ENST00000430771 SLU7O95391 586 aaKnown RBP11.08□□□□□ -0.64
CHD4-202ENST00000430771 OXTRP30559 389 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 DRD3P35462 400 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 MAGEA6P43360 314 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 TUBB4BP68371 445 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 CDK16Q00536 496 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 CNTN1Q12860 1018 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 CALCOCO2Q13137 446 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 GALNT3Q14435 633 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 KCNJ11Q14654 390 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 FAM182AQ5T1J6 154 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 AGBL4Q5VU57 503 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 IZUMO3Q5VZ72 239 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 KCTD11Q693B1 232 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 PPP1R21Q6ZMI0 780 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 HOOK3Q86VS8 718 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 PPIL6Q8IXY8 311 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 AADATQ8N5Z0 425 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 PDCD7Q8N8D1 485 aaKnown RBP11.08□□□□□ -0.64
CHD4-202ENST00000430771 NOA1Q8NC60 698 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms