RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 TSNAXIP1Q2TAA8 658 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 C5orf22Q49AR2 442 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 IL31Q6EBC2 164 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 EPGNQ6UW88 154 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 LDB1Q86U70 411 aaPredicted RBP16.34■□□□□ 0.21
MBD4-203ENST00000429544 ARHGAP24Q8N264 748 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 POU5F2Q8N7G0 328 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 PDZD8Q8NEN9 1154 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 GABPB2Q8TAK5 448 aaPredicted RBP16.34■□□□□ 0.21
MBD4-203ENST00000429544 HEXDCQ8WVB3 486 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 SGF29Q96ES7 293 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 IGSF21Q96ID5 467 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 TACO1Q9BSH4 297 aaKnown RBP16.34■□□□□ 0.21
MBD4-203ENST00000429544 ILKAPQ9H0C8 392 aaPredicted RBP16.34■□□□□ 0.21
MBD4-203ENST00000429544 MMADHCQ9H3L0 296 aaPredicted RBP16.34■□□□□ 0.21
MBD4-203ENST00000429544 MAN1C1Q9NR34 630 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 BACE2Q9Y5Z0 518 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 BUD23O43709 281 aaKnown RBP16.34■□□□□ 0.21
MBD4-203ENST00000429544 PIGNO95427 931 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 IRF1P10914 325 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 LEPRP48357 1165 aaKnown RBP16.34■□□□□ 0.21
MBD4-203ENST00000429544 APLP1P51693 650 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 PRKAA2P54646 552 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 CSHL1Q14406 222 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 TMC7Q7Z402 723 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 CILP2Q8IUL8 1156 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 BLOC1S5Q8TDH9 187 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 FEM1CQ96JP0 617 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 PRICKLE1Q96MT3 831 aaPredicted RBP16.34■□□□□ 0.21
MBD4-203ENST00000429544 SPON2Q9BUD6 331 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 SHCBP1LQ9BZQ2 653 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 MFSD1Q9H3U5 465 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 PAK6Q9NQU5 681 aaPredicted RBP16.34■□□□□ 0.21
MBD4-203ENST00000429544 MARCH4Q9P2E8 410 aaPredicted RBP16.34■□□□□ 0.21
MBD4-203ENST00000429544 RAP2CQ9Y3L5 183 aa16.34■□□□□ 0.21
MBD4-203ENST00000429544 SLC7A4O43246 635 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 LDB2O43679 373 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 PIRTP0C851 137 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 MYL4P12829 197 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 HMGA1P17096 107 aaKnown RBP16.33■□□□□ 0.2
MBD4-203ENST00000429544 GLDCP23378 1020 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 SGSHP51688 502 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 ARL13AQ5H913 290 aaPredicted RBP16.33■□□□□ 0.2
MBD4-203ENST00000429544 SPOUT1Q5T280 376 aaKnown RBP16.33■□□□□ 0.2
MBD4-203ENST00000429544 RNF135Q8IUD6 432 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 OVCA2Q8WZ82 227 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 FAM161BQ96MY7 647 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 CLSTN3Q9BQT9 956 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 MAGEH1Q9H213 219 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 MRPL46Q9H2W6 279 aaKnown RBP16.33■□□□□ 0.2
MBD4-203ENST00000429544 GKN1Q9NS71 199 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 IGSF5Q9NSI5 407 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 AFF4Q9UHB7 1163 aaKnown RBP16.33■□□□□ 0.2
MBD4-203ENST00000429544 PLA2G4CQ9UP65 541 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 C15orf41Q9Y2V0 281 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 ARL5AQ9Y689 179 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.33■□□□□ 0.2
MBD4-203ENST00000429544 E9PBE3 544 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 KLHL41O60662 606 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 FGF1P05230 155 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 TPBGLP0DKB5 382 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 CORO1AP31146 461 aaKnown RBP16.33■□□□□ 0.2
MBD4-203ENST00000429544 CDH4P55283 916 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 PLD1Q13393 1074 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 PTPRCAPQ14761 206 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 KHDC1Q4VXA5 237 aaKnown RBP16.33■□□□□ 0.2
MBD4-203ENST00000429544 CCNYL1Q8N7R7 359 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 WDR60Q8WVS4 1066 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 DNAJC1Q96KC8 554 aaKnown RBP16.33■□□□□ 0.2
MBD4-203ENST00000429544 PPP1R36Q96LQ0 422 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 ZNF599Q96NL3 588 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 SUDS3Q9H7L9 328 aaPredicted RBP16.33■□□□□ 0.2
MBD4-203ENST00000429544 CYP4F11Q9HBI6 524 aa16.33■□□□□ 0.2
MBD4-203ENST00000429544 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.33■□□□□ 0.2
MBD4-203ENST00000429544 H3BNC9 293 aa16.32■□□□□ 0.2
MBD4-203ENST00000429544 KLKB1P03952 638 aa16.32■□□□□ 0.2
MBD4-203ENST00000429544 HLA-DPA1P20036 260 aa16.32■□□□□ 0.2
MBD4-203ENST00000429544 KPNA2P52292 529 aaKnown RBP16.32■□□□□ 0.2
MBD4-203ENST00000429544 HECTD2Q5U5R9 776 aa16.32■□□□□ 0.2
MBD4-203ENST00000429544 RNF168Q8IYW5 571 aaPredicted RBP16.32■□□□□ 0.2
MBD4-203ENST00000429544 ENDOVQ8N8Q3 282 aaKnown RBP16.32■□□□□ 0.2
MBD4-203ENST00000429544 TXNDC5Q8NBS9 432 aaKnown RBP16.32■□□□□ 0.2
MBD4-203ENST00000429544 CLPTM1LQ96KA5 538 aa16.32■□□□□ 0.2
MBD4-203ENST00000429544 OR52B2Q96RD2 323 aa16.32■□□□□ 0.2
MBD4-203ENST00000429544 MRPL57Q9BQC6 102 aaKnown RBP16.32■□□□□ 0.2
MBD4-203ENST00000429544 TRPM5Q9NZQ8 1165 aa16.32■□□□□ 0.2
MBD4-203ENST00000429544 ANAPC1Q9H1A4 1944 aa16.32■□□□□ 0.2
MBD4-203ENST00000429544 COL4A6Q14031 1691 aa16.32■□□□□ 0.2
MBD4-203ENST00000429544 GOLGA8QA0A0J9YX86 632 aa16.31■□□□□ 0.2
MBD4-203ENST00000429544 GOLGA8OA6NCC3 632 aa16.31■□□□□ 0.2
MBD4-203ENST00000429544 GOLGA8NF8WBI6 632 aa16.31■□□□□ 0.2
MBD4-203ENST00000429544 NEMP1O14524 444 aa16.31■□□□□ 0.2
MBD4-203ENST00000429544 TSPAN3O60637 253 aa16.31■□□□□ 0.2
MBD4-203ENST00000429544 MAGEC1O60732 1142 aa16.31■□□□□ 0.2
MBD4-203ENST00000429544 STC2O76061 302 aa16.31■□□□□ 0.2
MBD4-203ENST00000429544 SERPINF2P08697 491 aa16.31■□□□□ 0.2
MBD4-203ENST00000429544 RPL14P50914 215 aaKnown RBP16.31■□□□□ 0.2
MBD4-203ENST00000429544 OXCT1P55809 520 aa16.31■□□□□ 0.2
MBD4-203ENST00000429544 TAF12Q16514 161 aa16.31■□□□□ 0.2
MBD4-203ENST00000429544 DNAL1Q4LDG9 190 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms