RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 DONSONQ9NYP3 566 aa13.26□□□□□ -0.29
HLA-F-219ENST00000429294 SIRPGQ9P1W8 387 aa13.26□□□□□ -0.29
HLA-F-219ENST00000429294 HECTD1Q9ULT8 2610 aa13.26□□□□□ -0.29
HLA-F-219ENST00000429294 MFHAS1Q9Y4C4 1052 aa13.26□□□□□ -0.29
HLA-F-219ENST00000429294 TLN1Q9Y490 2541 aaKnown RBP13.26□□□□□ -0.29
HLA-F-219ENST00000429294 C2CD4BA6NLJ0 364 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 F8VZ95 297 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 NTN3O00634 580 aaPredicted RBP13.25□□□□□ -0.29
HLA-F-219ENST00000429294 SLC28A2O43868 658 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 JMJD7P0C870 316 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 KRT3P12035 628 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 MMP8P22894 467 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 ERCC5P28715 1186 aaPredicted RBP13.25□□□□□ -0.29
HLA-F-219ENST00000429294 EPHB2P29323 1055 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 YBEYP58557 167 aaPredicted RBP13.25□□□□□ -0.29
HLA-F-219ENST00000429294 CDR2Q01850 454 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 KCNC4Q03721 635 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 CLN3Q13286 438 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 HSP90AA4PQ58FG1 418 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 EFHC2Q5JST6 749 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 ERAP2Q6P179 960 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 ENPP7Q6UWV6 458 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 TRIM72Q6ZMU5 477 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 TP53I13Q8NBR0 393 aaPredicted RBP13.25□□□□□ -0.29
HLA-F-219ENST00000429294 PCDH19Q8TAB3 1148 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 GPT2Q8TD30 523 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 HCAR2Q8TDS4 363 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 FAM172AQ8WUF8 416 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 NTAN1Q96AB6 310 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 C11orf70Q9BRQ4 267 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 NAA15Q9BXJ9 866 aaKnown RBP13.25□□□□□ -0.29
HLA-F-219ENST00000429294 CPEB1Q9BZB8 566 aaKnown RBP13.25□□□□□ -0.29
HLA-F-219ENST00000429294 EDEM3Q9BZQ6 932 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 SEMA4CQ9C0C4 833 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 CLPBQ9H078 707 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 CLMPQ9H6B4 373 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 MBNL1Q9NR56 388 aaKnown RBP13.25□□□□□ -0.29
HLA-F-219ENST00000429294 ATXN7L1Q9ULK2 861 aaPredicted RBP13.25□□□□□ -0.29
HLA-F-219ENST00000429294 GPR34Q9UPC5 381 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 PCDHGA7Q9Y5G6 932 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 HEMK1Q9Y5R4 338 aaPredicted RBP13.25□□□□□ -0.29
HLA-F-219ENST00000429294 CHD5Q8TDI0 1954 aa13.25□□□□□ -0.29
HLA-F-219ENST00000429294 ANKRD62A6NC57 917 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 FAM72CH0Y354 149 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 GFPT2O94808 682 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 TPM2P07951 284 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 TIMP2P16035 220 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 DESP17661 470 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 SLC5A2P31639 672 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 NSFP46459 744 aaKnown RBP13.24□□□□□ -0.29
HLA-F-219ENST00000429294 INHBCP55103 352 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 NFATC4Q14934 902 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 IRF4Q15306 451 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 SYCP1Q15431 976 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 PARP15Q460N3 678 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 TMEM52BQ4KMG9 183 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 FAM72AQ5TYM5 149 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 FAM72DQ6L9T8 149 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 XKR5Q6UX68 686 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 USP53Q70EK8 1073 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 SLFN11Q7Z7L1 901 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 PHLDB2Q86SQ0 1253 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 FAM72BQ86X60 149 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 PAF1Q8N7H5 531 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 RTL3Q8N8U3 475 aaKnown RBP13.24□□□□□ -0.29
HLA-F-219ENST00000429294 KYQ8NBH2 561 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 TSACCQ96A04 125 aaPredicted RBP13.24□□□□□ -0.29
HLA-F-219ENST00000429294 CCDC74AQ96AQ1 378 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 HMCESQ96FZ2 354 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 ARHGAP9Q9BRR9 750 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 SELENOOQ9BVL4 669 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 FAM117AQ9C073 453 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 CATSPERBQ9H7T0 1116 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 SEPT10Q9P0V9 454 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 KLQ9UEF7 1012 aa13.24□□□□□ -0.29
HLA-F-219ENST00000429294 PMS2P1A4D2B8 440 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 RASA4BC9J798 803 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 D6RAR5 112 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 RASA4O43374 803 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 TNFP01375 233 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 CYP1A1P04798 512 aaPredicted RBP13.23□□□□□ -0.29
HLA-F-219ENST00000429294 RPLP0P05388 317 aaKnown RBP13.23□□□□□ -0.29
HLA-F-219ENST00000429294 ITIH2P19823 946 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 GPD1P21695 349 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 EEF1GP26641 437 aaKnown RBP13.23□□□□□ -0.29
HLA-F-219ENST00000429294 UGT1A5P35504 534 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 PDX1P52945 283 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 HDAC4P56524 1084 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 SRP54P61011 504 aaKnown RBP13.23□□□□□ -0.29
HLA-F-219ENST00000429294 CCL7P80098 99 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 TCEA2Q15560 299 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 UGP2Q16851 508 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 ALG11Q2TAA5 492 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 WSCD2Q2TBF2 565 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 RAB6CQ53S08 254 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 SCYL2Q6P3W7 929 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 BRAT1Q6PJG6 821 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 DNAAF5Q86Y56 855 aa13.23□□□□□ -0.29
HLA-F-219ENST00000429294 CCDC185Q8N715 623 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms