RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 MYLK4Q86YV6 388 aaPredicted RBP13.8□□□□□ -0.2
THBS3-202ENST00000428962 BBS5Q8N3I7 341 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 AFAP1L2Q8N4X5 818 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 AGR3Q8TD06 166 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 JADE3Q92613 823 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 PEX13Q92968 403 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 IGSF8Q969P0 613 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 TADA1Q96BN2 335 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 ZNF599Q96NL3 588 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 PANX3Q96QZ0 392 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 OMDQ99983 421 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 RTKNQ9BST9 563 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 GPR62Q9BZJ7 368 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 POLR1EQ9GZS1 481 aaKnown RBP13.8□□□□□ -0.2
THBS3-202ENST00000428962 MFSD1Q9H3U5 465 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 MRGBPQ9NV56 204 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 NMRK1Q9NWW6 199 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 MROH6A6NGR9 719 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 TRPC5OSA6NMA1 111 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 F5H5T6 163 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 CCNT2O60583 730 aaKnown RBP13.79□□□□□ -0.2
THBS3-202ENST00000428962 TBX10O75333 385 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 TBX18O95935 607 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 HMBSP08397 361 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 RBP1P09455 135 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 LTA4HP09960 611 aaKnown RBP13.79□□□□□ -0.2
THBS3-202ENST00000428962 THRAP10827 490 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 HOXB8P17481 243 aaPredicted RBP13.79□□□□□ -0.2
THBS3-202ENST00000428962 HLA-DPA1P20036 260 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 OR1E1P30953 314 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 PBX3P40426 434 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 PRAMEP78395 509 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 CUL3Q13618 768 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 ZNF235Q14590 738 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 AAGABQ6PD74 315 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 CNSTQ6PJW8 725 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 ANKS3Q6ZW76 656 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 KIRREL3Q8IZU9 778 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 MAPK15Q8TD08 544 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 GPR152Q8TDT2 470 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 IFT43Q96FT9 208 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 ZNF333Q96JL9 665 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 FEM1CQ96JP0 617 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 CLPTM1LQ96KA5 538 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 CEP295NLQ96MC4 621 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 CASD1Q96PB1 797 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 TMEM175Q9BSA9 504 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 MARCH5Q9NX47 278 aa13.79□□□□□ -0.2
THBS3-202ENST00000428962 UXTQ9UBK9 157 aaPredicted RBP13.79□□□□□ -0.2
THBS3-202ENST00000428962 ENPP3O14638 875 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 MAP3K7O43318 606 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 ZBTB14O43829 449 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 PRAMEF11O60813 436 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 FGF1P05230 155 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 TFEBP19484 476 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 TACR2P21452 398 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 SLC26A3P40879 764 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 SLC11A1P49279 550 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 BTKQ06187 659 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 DLG1Q12959 904 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 BTG3Q14201 252 aaPredicted RBP13.78□□□□□ -0.2
THBS3-202ENST00000428962 SLC14A2Q15849 920 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 SIRPB2Q5JXA9 342 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 RASIP1Q5U651 963 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 CILP2Q8IUL8 1156 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 PHTF2Q8N3S3 785 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 CPSF7Q8N684 471 aaKnown RBP13.78□□□□□ -0.2
THBS3-202ENST00000428962 OR13J1Q8NGT2 312 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 ARRDC2Q8TBH0 407 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 DTX3LQ8TDB6 740 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 HEXDCQ8WVB3 486 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 SEPT8Q92599 483 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 FAR2Q96K12 515 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 OR52B2Q96RD2 323 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 POMKQ9H5K3 350 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 MAN1C1Q9NR34 630 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 NDE1Q9NXR1 346 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 CORO1CQ9ULV4 474 aaPredicted RBP13.78□□□□□ -0.2
THBS3-202ENST00000428962 SLC27A5Q9Y2P5 690 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 LOC285095A0A1B0GVY8 99 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 GRID2O43424 1007 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 TLR5O60602 858 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 SOAT2O75908 522 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 GNRH1P01148 92 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 EPOP01588 193 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 ZDHHC11BP0C7U3 371 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 PPARGP37231 505 aaPredicted RBP13.78□□□□□ -0.2
THBS3-202ENST00000428962 TTC3P53804 2025 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 MSLNQ13421 630 aaPredicted RBP13.78□□□□□ -0.2
THBS3-202ENST00000428962 CSHL1Q14406 222 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 TECRLQ5HYJ1 363 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 RNF19BQ6ZMZ0 732 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 CCNYL1Q8N7R7 359 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 EML4Q9HC35 981 aaKnown RBP13.78□□□□□ -0.2
THBS3-202ENST00000428962 HMX1Q9NP08 348 aaPredicted RBP13.78□□□□□ -0.2
THBS3-202ENST00000428962 IGSF5Q9NSI5 407 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 CDH22Q9UJ99 828 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 PHF24Q9UPV7 400 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 SSX2IPQ9Y2D8 614 aa13.78□□□□□ -0.2
THBS3-202ENST00000428962 SLC38A8A6NNN8 435 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms