RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 DNAJC24Q6P3W2 148 aa17.6■□□□□ 0.41
DDR1-235ENST00000428153 PHLDB2Q86SQ0 1253 aa17.6■□□□□ 0.41
DDR1-235ENST00000428153 VPS36Q86VN1 386 aa17.6■□□□□ 0.41
DDR1-235ENST00000428153 ZNF354CQ86Y25 554 aa17.6■□□□□ 0.41
DDR1-235ENST00000428153 DNAAF5Q86Y56 855 aa17.6■□□□□ 0.41
DDR1-235ENST00000428153 SNRNP27Q8WVK2 155 aaKnown RBP17.6■□□□□ 0.41
DDR1-235ENST00000428153 HMCESQ96FZ2 354 aa17.6■□□□□ 0.41
DDR1-235ENST00000428153 ZNF641Q96N77 438 aaPredicted RBP17.6■□□□□ 0.41
DDR1-235ENST00000428153 ERGIC2Q96RQ1 377 aa17.6■□□□□ 0.41
DDR1-235ENST00000428153 LRRC61Q9BV99 259 aa17.6■□□□□ 0.41
DDR1-235ENST00000428153 CAAP1Q9H8G2 361 aa17.6■□□□□ 0.41
DDR1-235ENST00000428153 LIMA1Q9UHB6 759 aaKnown RBP17.6■□□□□ 0.41
DDR1-235ENST00000428153 FZD10Q9ULW2 581 aa17.6■□□□□ 0.41
DDR1-235ENST00000428153 FLNBO75369 2602 aaKnown RBP17.59■□□□□ 0.41
DDR1-235ENST00000428153 CFAP69A5D8W1 941 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 CCP110O43303 1012 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 MMP20O60882 483 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 GCATO75600 419 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 XPAP23025 273 aaPredicted RBP17.59■□□□□ 0.41
DDR1-235ENST00000428153 RBMS1P29558 406 aaKnown RBP17.59■□□□□ 0.41
DDR1-235ENST00000428153 NDST2P52849 883 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 COPB1P53618 953 aaKnown RBP17.59■□□□□ 0.41
DDR1-235ENST00000428153 RHDQ02161 417 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 ELOCQ15369 112 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 KLHL40Q2TBA0 621 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 PPP1R15BQ5SWA1 713 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 ESRP1Q6NXG1 681 aaKnown RBP17.59■□□□□ 0.41
DDR1-235ENST00000428153 BRAT1Q6PJG6 821 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 SLC35F3Q8IY50 421 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 RBFAQ8N0V3 343 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 PYROXD2Q8N2H3 581 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 KCNE4Q8WWG9 221 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 SCG3Q8WXD2 468 aaKnown RBP17.59■□□□□ 0.41
DDR1-235ENST00000428153 VCPIP1Q96JH7 1222 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 SLC46A1Q96NT5 459 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 TUBGCP5Q96RT8 1024 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 FANCLQ9NW38 375 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 LHX3Q9UBR4 397 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 ENTPD2Q9Y5L3 495 aa17.59■□□□□ 0.41
DDR1-235ENST00000428153 COL6A6A6NMZ7 2263 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 YY2O15391 372 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 ALPIP09923 528 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 TSHRP16473 764 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 HTR1BP28222 390 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 CSNK1DP48730 415 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 HK3P52790 923 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 ADKP55263 362 aaKnown RBP17.58■□□□□ 0.4
DDR1-235ENST00000428153 CXADRP78310 365 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 LRRC14Q15048 493 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 UGP2Q16851 508 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 FAXCQ5TGI0 409 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 SCYL2Q6P3W7 929 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 LEKR1Q6ZMV7 388 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 OR6C4Q8NGE1 309 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 ATL2Q8NHH9 583 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 MCEEQ96PE7 176 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 AGPAT1Q99943 283 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 NCAPGQ9BPX3 1015 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 KLC2Q9H0B6 622 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 SUV39H2Q9H5I1 410 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 LRRC19Q9H756 370 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 PDFQ9HBH1 243 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 MBNL1Q9NR56 388 aaKnown RBP17.58■□□□□ 0.4
DDR1-235ENST00000428153 LMBRD1Q9NUN5 540 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 ANO10Q9NW15 660 aa17.58■□□□□ 0.4
DDR1-235ENST00000428153 UBA2Q9UBT2 640 aaPredicted RBP17.58■□□□□ 0.4
DDR1-235ENST00000428153 PNMA8BQ9ULN7 279 aaPredicted RBP17.58■□□□□ 0.4
DDR1-235ENST00000428153 NTN3O00634 580 aaPredicted RBP17.57■□□□□ 0.4
DDR1-235ENST00000428153 MUSKO15146 869 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 CREB3O43889 395 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 C1QL1O75973 258 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 RPL7AP62424 266 aaKnown RBP17.57■□□□□ 0.4
DDR1-235ENST00000428153 MYL5Q02045 173 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 IRF4Q15306 451 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 CYTH1Q15438 398 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 ERAP2Q6P179 960 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 DCUN1D2Q6PH85 259 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 ARL14Q8N4G2 192 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 ARL10Q8N8L6 244 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 WDR36Q8NI36 951 aaKnown RBP17.57■□□□□ 0.4
DDR1-235ENST00000428153 PCMTD1Q96MG8 357 aaPredicted RBP17.57■□□□□ 0.4
DDR1-235ENST00000428153 CLPBQ9H078 707 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 TCEAL2Q9H3H9 227 aaPredicted RBP17.57■□□□□ 0.4
DDR1-235ENST00000428153 PADI4Q9UM07 663 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 MYO6Q9UM54 1294 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 SATB2Q9UPW6 733 aa17.57■□□□□ 0.4
DDR1-235ENST00000428153 ASH1LQ9NR48 2969 aaKnown RBP17.57■□□□□ 0.4
DDR1-235ENST00000428153 SETXQ7Z333 2677 aaKnown RBP17.56■□□□□ 0.4
DDR1-235ENST00000428153 CDRT15L2A8MXV6 281 aa17.56■□□□□ 0.4
DDR1-235ENST00000428153 TMX2-CTNND1H3BSU7 103 aa17.56■□□□□ 0.4
DDR1-235ENST00000428153 PRAMEF11O60813 436 aa17.56■□□□□ 0.4
DDR1-235ENST00000428153 RASGRP1O95267 797 aa17.56■□□□□ 0.4
DDR1-235ENST00000428153 C6P13671 934 aa17.56■□□□□ 0.4
DDR1-235ENST00000428153 FERP16591 822 aa17.56■□□□□ 0.4
DDR1-235ENST00000428153 ZNF135P52742 658 aaPredicted RBP17.56■□□□□ 0.4
DDR1-235ENST00000428153 UBXN1Q04323 297 aa17.56■□□□□ 0.4
DDR1-235ENST00000428153 EIF3IQ13347 325 aaKnown RBP17.56■□□□□ 0.4
DDR1-235ENST00000428153 NFATC4Q14934 902 aa17.56■□□□□ 0.4
DDR1-235ENST00000428153 WSCD2Q2TBF2 565 aa17.56■□□□□ 0.4
DDR1-235ENST00000428153 C3orf38Q5JPI3 329 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms