RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ARL4AP40617 200 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 HNRNPKP61978 463 aaKnown RBP eCLIP18.58■□□□□ 0.56
PSPC1-202ENST00000427943 ELP6Q0PNE2 266 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 ACAP1Q15027 740 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 DPYSL2Q16555 572 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 CFAP58Q5T655 872 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 SRLQ86TD4 932 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 CAMK1DQ8IU85 385 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 TP53I13Q8NBR0 393 aaPredicted RBP18.58■□□□□ 0.56
PSPC1-202ENST00000427943 ZNF548Q8NEK5 533 aaPredicted RBP18.58■□□□□ 0.56
PSPC1-202ENST00000427943 CENPTQ96BT3 561 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 PCDH12Q9NPG4 1184 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 MBNL1Q9NR56 388 aaKnown RBP18.58■□□□□ 0.56
PSPC1-202ENST00000427943 ETNK2Q9NVF9 386 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 KLF15Q9UIH9 416 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 LUC7L2Q9Y383 392 aaKnown RBP18.58■□□□□ 0.56
PSPC1-202ENST00000427943 APC2O95996 2303 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 KNTC1P50748 2209 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 H3BM21 787 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 MUSKO15146 869 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 RARAP10276 462 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 ALPPL2P10696 532 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 JUPP14923 745 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 PTMSP20962 102 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 CASP14P31944 242 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 HCAR3P49019 387 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 ZNF135P52742 658 aaPredicted RBP18.57■□□□□ 0.56
PSPC1-202ENST00000427943 THOP1P52888 689 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 IL10RBQ08334 325 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 CYP4F3Q08477 520 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 EIF2B5Q13144 721 aaKnown RBP18.57■□□□□ 0.56
PSPC1-202ENST00000427943 PIGHQ14442 188 aaPredicted RBP18.57■□□□□ 0.56
PSPC1-202ENST00000427943 GRM3Q14832 879 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 IRF4Q15306 451 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 UGP2Q16851 508 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 TMEM52BQ4KMG9 183 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 RBFAQ8N0V3 343 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 IQCDQ96DY2 449 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 TUBGCP5Q96RT8 1024 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 C1QTNF7Q9BXJ2 289 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 XPO4Q9C0E2 1151 aaKnown RBP18.57■□□□□ 0.56
PSPC1-202ENST00000427943 ATP13A3Q9H7F0 1226 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 NLGN3Q9NZ94 848 aa18.57■□□□□ 0.56
PSPC1-202ENST00000427943 CYP1A2P05177 515 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 CDK4P11802 303 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 C6P13671 934 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 JUNDP17535 347 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 SERPINA4P29622 427 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 MMP12P39900 470 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 SLC25A11Q02978 314 aaKnown RBP18.56■□□□□ 0.56
PSPC1-202ENST00000427943 ILKQ13418 452 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 CCDC122Q5T0U0 273 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 ALKBH5Q6P6C2 394 aaKnown RBP18.56■□□□□ 0.56
PSPC1-202ENST00000427943 BRAT1Q6PJG6 821 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 TMCO3Q6UWJ1 677 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 POLNQ7Z5Q5 900 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 PAF1Q8N7H5 531 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 PDCD7Q8N8D1 485 aaKnown RBP18.56■□□□□ 0.56
PSPC1-202ENST00000427943 NIPA2Q8N8Q9 360 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 APOLD1Q96LR9 279 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 ZNF641Q96N77 438 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-202ENST00000427943 CSPG4P5Q96PW8 444 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 TCEAL2Q9H3H9 227 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-202ENST00000427943 PCDH18Q9HCL0 1135 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 IP6K2Q9UHH9 426 aa18.56■□□□□ 0.56
PSPC1-202ENST00000427943 PNMA8BQ9ULN7 279 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-202ENST00000427943 COL27A1Q8IZC6 1860 aaPredicted RBP18.56■□□□□ 0.56
PSPC1-202ENST00000427943 TTC24A2A3L6 582 aaPredicted RBP18.55■□□□□ 0.56
PSPC1-202ENST00000427943 NEMP2A6NFY4 417 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 K7ESM1 405 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 RIOK3O14730 519 aaKnown RBP18.55■□□□□ 0.56
PSPC1-202ENST00000427943 SCAMP1O15126 338 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 AQP9O43315 295 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 GJC1P36383 396 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 SSR1P43307 286 aaKnown RBP18.55■□□□□ 0.56
PSPC1-202ENST00000427943 CSNK1DP48730 415 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 SUOXP51687 545 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 INSM1Q01101 510 aaPredicted RBP18.55■□□□□ 0.56
PSPC1-202ENST00000427943 SLC10A7Q0GE19 358 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 TARDBPQ13148 414 aaKnown RBP eCLIP18.55■□□□□ 0.56
PSPC1-202ENST00000427943 RFTN1Q14699 578 aaPredicted RBP18.55■□□□□ 0.56
PSPC1-202ENST00000427943 LBRQ14739 615 aaKnown RBP18.55■□□□□ 0.56
PSPC1-202ENST00000427943 BOLA3Q53S33 107 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 TMCO4Q5TGY1 634 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 ERAP2Q6P179 960 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 CPNE8Q86YQ8 564 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 LZTR1Q8N653 840 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 HCAR2Q8TDS4 363 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 LMX1AQ8TE12 382 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 NSMCE3Q96MG7 304 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 APOBEC3BQ9UH17 382 aaKnown RBP18.55■□□□□ 0.56
PSPC1-202ENST00000427943 ATP8A1Q9Y2Q0 1164 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 RAXQ9Y2V3 346 aa18.55■□□□□ 0.56
PSPC1-202ENST00000427943 FAM208BQ5VWN6 2430 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 LY6G6EA0A0G2JKS1 128 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 EIF4A3P38919 411 aaKnown RBP18.54■□□□□ 0.56
PSPC1-202ENST00000427943 LIG3P49916 1009 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 SCNN1BP51168 640 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 BCL2L1Q07817 233 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 PTK2BQ14289 1009 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms