RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 TMEM25Q86YD3 366 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 SLC25A41Q8N5S1 370 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 KIAA1958Q8N8K9 716 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 PPHLN1Q8NEY8 458 aaKnown RBP18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 ACDQ96AP0 544 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 OTUB2Q96DC9 234 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 NSMCE3Q96MG7 304 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 ZNF778Q96MU6 729 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 NUDCD1Q96RS6 583 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 TRIB3Q96RU7 358 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 RANBP9Q96S59 729 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 C2orf49Q9BVC5 232 aaPredicted RBP18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 KIF9Q9HAQ2 790 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 NOD2Q9HC29 1040 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 SSU72Q9NP77 194 aaKnown RBP18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 LHX3Q9UBR4 397 aa18.12■□□□□ 0.49
AC055811.2-201ENST00000427497 CXorf51AA0A1B0GTR3 108 aa18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 INSIG1O15503 277 aa18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 FSHRP23945 695 aa18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 SERPINB9P50453 376 aa18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 SERPINH1P50454 418 aaKnown RBP18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 CDK18Q07002 472 aa18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 NSUN2Q08J23 767 aaKnown RBP eCLIP18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 SLC12A1Q13621 1099 aa18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 MPP2Q14168 576 aa18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 SIRPB2Q5JXA9 342 aa18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 TTC19Q6DKK2 380 aaPredicted RBP18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 IRF7Q92985 503 aa18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 SPHK2Q9NRA0 654 aa18.11■□□□□ 0.49
AC055811.2-201ENST00000427497 PRPF4O43172 522 aaKnown RBP eCLIP18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 KRT37O76014 449 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 SNRPAP09012 282 aaKnown RBP18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 ERVK-10P10266 1014 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 HLA-DPA1P20036 260 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 CD70P32970 193 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 SLC18A1P54219 525 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 PLEKHG6Q3KR16 790 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 LGSNQ5TDP6 509 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 RASSF3Q86WH2 238 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 CELF5Q8N6W0 485 aaKnown RBP18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 NXPE3Q969Y0 559 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 SMC6Q96SB8 1091 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 LINC00597Q9H2U6 94 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 PPANQ9NQ55 473 aaKnown RBP18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 TREX1Q9NSU2 369 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 INTS6Q9UL03 887 aaKnown RBP18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 MYOFQ9NZM1 2061 aa18.1■□□□□ 0.49
AC055811.2-201ENST00000427497 HMX2A2RU54 273 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 NARSO43776 548 aaKnown RBP18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 KRT38O76015 456 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 FGF1P05230 155 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 CNTFP26441 200 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 LSP1P33241 339 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 SCNN1BP51168 640 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 PTPN5P54829 565 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 PPARDQ03181 441 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 RETSATQ6NUM9 610 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 PACS1Q6VY07 963 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 SH2D5Q6ZV89 423 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 ADGRG2Q8IZP9 1017 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 CNPY4Q8N129 248 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 MTBPQ96DY7 904 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 IFT43Q96FT9 208 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 EXOC2Q96KP1 924 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 MFSD1Q9H3U5 465 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 KCNK9Q9NPC2 374 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 SCUBE2Q9NQ36 999 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 IL1RAPL1Q9NZN1 696 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 MARK1Q9P0L2 795 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 ZFATQ9P243 1243 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 SLC17A6Q9P2U8 582 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 HEATR9A2RTY3 570 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 SRRM3A6NNA2 597 aaPredicted RBP18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 TRIM49D1C9J1S8 452 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 ANHXE9PGG2 379 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 SLC9A3R1O14745 358 aaPredicted RBP18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 TYROBPO43914 113 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 NDST3O95803 873 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 MT-CO1P00395 513 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 KRT4P19013 534 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 HLA-FP30511 346 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 TCF15Q12870 199 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 RALGPS1Q5JS13 557 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 TEDDM1Q5T9Z0 273 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 PDPK2PQ6A1A2 396 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 KCNMB4Q86W47 210 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 NPAS3Q8IXF0 933 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 C4orf33Q8N1A6 199 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 SLC44A3Q8N4M1 653 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 LRRC3BQ96PB8 259 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 BBS2Q9BXC9 721 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 ABCB8Q9NUT2 735 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 INTS9Q9NV88 658 aaKnown RBP18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 SMG5Q9UPR3 1016 aaKnown RBP18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 PSAT1Q9Y617 370 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 WNT6Q9Y6F9 365 aa18.09■□□□□ 0.49
AC055811.2-201ENST00000427497 CACNA1HO95180 2353 aa18.08■□□□□ 0.49
AC055811.2-201ENST00000427497 FAM47DPA6NHR8 397 aa18.08■□□□□ 0.48
AC055811.2-201ENST00000427497 PAPSS2O95340 614 aaPredicted RBP18.08■□□□□ 0.48
AC055811.2-201ENST00000427497 MT-ND3P03897 115 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms