RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 STBD1O95210 358 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 MLYCDO95822 493 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 UNGP13051 313 aaPredicted RBP13.96□□□□□ -0.17
RPL28-202ENST00000426763 POLE2P56282 527 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 SCUBE1Q8IWY4 988 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 MREGQ8N565 214 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 OR7D4Q8NG98 312 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 MAGED4Q96JG8 741 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 MRPL57Q9BQC6 102 aaKnown RBP13.96□□□□□ -0.17
RPL28-202ENST00000426763 ARMC7Q9H6L4 198 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 SOHLH2Q9NX45 425 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 GDAP2Q9NXN4 497 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 PER2O15055 1255 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 RRM2P31350 389 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 RPA3P35244 121 aaPredicted RBP13.96□□□□□ -0.17
RPL28-202ENST00000426763 RABGGTBP53611 331 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 AP1S1P61966 158 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 TAF5Q15542 800 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 ATAD3BQ5T9A4 648 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 HLA-DQA1Q5Y7H0 255 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 LINGO4Q6UY18 593 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 TMEM139Q8IV31 216 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 PCYT2Q99447 389 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 SLC25A51Q9H1U9 297 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 HMGXB4Q9UGU5 601 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 SQORQ9Y6N5 450 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 AVILO75366 819 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 USP1O94782 785 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 POP4O95707 220 aaKnown RBP13.96□□□□□ -0.17
RPL28-202ENST00000426763 SCNN1AP37088 669 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 CRYMQ14894 314 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 CERCAMQ5T4B2 595 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 SYT12Q8IV01 421 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 PYROXD2Q8N2H3 581 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 KYQ8NBH2 561 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 ZNF398Q8TD17 642 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 HMCESQ96FZ2 354 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 OSBPL1AQ9BXW6 950 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 KLHL28Q9NXS3 571 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 TLR6Q9Y2C9 796 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 SLC27A6Q9Y2P4 619 aa13.96□□□□□ -0.17
RPL28-202ENST00000426763 GLYATL1P3A0A0U1RQE8 302 aa13.96□□□□□ -0.18
RPL28-202ENST00000426763 TPST1O60507 370 aa13.96□□□□□ -0.18
RPL28-202ENST00000426763 WASP42768 502 aa13.96□□□□□ -0.18
RPL28-202ENST00000426763 HADHBP55084 474 aaKnown RBP13.96□□□□□ -0.18
RPL28-202ENST00000426763 IL10RBQ08334 325 aa13.96□□□□□ -0.18
RPL28-202ENST00000426763 SLC39A4Q6P5W5 647 aa13.96□□□□□ -0.18
RPL28-202ENST00000426763 LPIN3Q9BQK8 851 aa13.96□□□□□ -0.18
RPL28-202ENST00000426763 ERVW-1Q9UQF0 538 aa13.96□□□□□ -0.18
RPL28-202ENST00000426763 CCDC154A6NI56 674 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 ABCB1P08183 1280 aaPredicted RBP13.95□□□□□ -0.18
RPL28-202ENST00000426763 RHBDF2Q6PJF5 856 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 TXNDC11Q6PKC3 985 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 TMC5Q6UXY8 1006 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 ENTPD4Q9Y227 616 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 R3HDM2Q9Y2K5 976 aaKnown RBP13.95□□□□□ -0.18
RPL28-202ENST00000426763 NUP98P52948 1817 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 SGTAO43765 313 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 RNASEH2AO75792 299 aaKnown RBP13.95□□□□□ -0.18
RPL28-202ENST00000426763 SLC11A1P49279 550 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 ABRQ12979 859 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 BEND7Q8N7W2 519 aaPredicted RBP13.95□□□□□ -0.18
RPL28-202ENST00000426763 KCTD14Q9BQ13 255 aaPredicted RBP13.95□□□□□ -0.18
RPL28-202ENST00000426763 RXFP1Q9HBX9 757 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 PLOD1Q02809 727 aaPredicted RBP13.95□□□□□ -0.18
RPL28-202ENST00000426763 C17orf99Q6UX52 265 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 SERINC5Q86VE9 423 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 P3H2Q8IVL5 708 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 FAM126BQ8IXS8 530 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 RAVER1Q8IY67 606 aaKnown RBP13.95□□□□□ -0.18
RPL28-202ENST00000426763 RDH11Q8TC12 318 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 KCTD4Q8WVF5 259 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 VPS33AQ96AX1 596 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 OXNAD1Q96HP4 312 aaPredicted RBP13.95□□□□□ -0.18
RPL28-202ENST00000426763 ZBED3Q96IU2 234 aaPredicted RBP13.95□□□□□ -0.18
RPL28-202ENST00000426763 FEM1CQ96JP0 617 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 OLFM3Q96PB7 478 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 HAPLN3Q96S86 360 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 VWA7Q9Y334 891 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 A0A1W2PRU2 124 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 TCRBV9S1A1TA0A576 114 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 ZNF682O95780 498 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 SHBGP04278 402 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 VEGFBP49765 207 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 CNSTQ6PJW8 725 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 ANKS1BQ7Z6G8 1248 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 AUTS2Q8WXX7 1259 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 ARHGAP39Q9C0H5 1083 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 MAPRE3Q9UPY8 281 aa13.95□□□□□ -0.18
RPL28-202ENST00000426763 IRAK2O43187 625 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 ALBP02768 609 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 DDX6P26196 483 aaKnown RBP eCLIP13.94□□□□□ -0.181e-33■□□□□ 11.1
RPL28-202ENST00000426763 CAPZA2P47755 286 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 NAGLUP54802 743 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 ALDH6A1Q02252 535 aaKnown RBP13.94□□□□□ -0.18
RPL28-202ENST00000426763 DSC2Q02487 901 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 TCEA2Q15560 299 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 PACS1Q6VY07 963 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 CIR1Q86X95 450 aaPredicted RBP13.94□□□□□ -0.18
RPL28-202ENST00000426763 OR4K2Q8NGD2 314 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms