RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ANKMY2Q8IV38 441 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 DCAF4L2Q8NA75 395 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 DTWD2Q8NBA8 298 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 LRRN4Q8WUT4 740 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 ACDQ96AP0 544 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 HDAC11Q96DB2 347 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 SELENOSQ9BQE4 189 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 INTS9Q9NV88 658 aaKnown RBP15.82■□□□□ 0.12
SHOX2-202ENST00000425436 EURLQ9NYK6 297 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 RABGEF1Q9UJ41 708 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 SLC25A13Q9UJS0 675 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 MMP17Q9ULZ9 603 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 KMT2EQ8IZD2 1858 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 ERICH4A6NGS2 130 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 J3KR12 359 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 SMAD6O43541 496 aaKnown RBP15.81■□□□□ 0.12
SHOX2-202ENST00000425436 EPHX1P07099 455 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 SRPRAP08240 638 aaKnown RBP15.81■□□□□ 0.12
SHOX2-202ENST00000425436 HOXB2P14652 356 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 COL9A1P20849 921 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 ETFBP38117 255 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 ELK3P41970 407 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 MAGEA9P43362 315 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 GALNT2Q10471 571 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 ACCSLQ4AC99 568 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 MSS51Q4VC12 460 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 KIAA1211LQ6NV74 962 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 CYS1Q717R9 158 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 B4GALNT4Q76KP1 1039 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 TRMT11Q7Z4G4 463 aaKnown RBP15.81■□□□□ 0.12
SHOX2-202ENST00000425436 SPATS2Q86XZ4 545 aaKnown RBP15.81■□□□□ 0.12
SHOX2-202ENST00000425436 MAML1Q92585 1016 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 LGMNQ99538 433 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 NAT9Q9BTE0 207 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 TMEM245Q9H330 911 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 CCDC134Q9H6E4 229 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 SHROOM3Q8TF72 1996 aa15.81■□□□□ 0.12
SHOX2-202ENST00000425436 MUC22E2RYF6 1773 aaPredicted RBP15.81■□□□□ 0.12
SHOX2-202ENST00000425436 ARHGAP42A6NI28 874 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 ERI2A8K979 691 aaKnown RBP15.8■□□□□ 0.12
SHOX2-202ENST00000425436 AP3B1O00203 1094 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 RNF103O00237 685 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 NDUFAB1O14561 156 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 PSMD3O43242 534 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 METTL18O95568 372 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 CD160O95971 181 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 FAM107AO95990 144 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 VAV1P15498 845 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 CHN1P15882 459 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 NNMTP40261 264 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 MSH2P43246 934 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 CXCL12P48061 93 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 ENPP2Q13822 863 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 CRY1Q16526 586 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 EOGTQ5NDL2 527 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 LGSNQ5TDP6 509 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 TTC19Q6DKK2 380 aaPredicted RBP15.8■□□□□ 0.12
SHOX2-202ENST00000425436 ITPRIPL1Q6GPH6 555 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 RETSATQ6NUM9 610 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 ADGRD1Q6QNK2 874 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 TSSK4Q6SA08 328 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 SYT13Q7L8C5 426 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 C1orf210Q8IVY1 113 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 PPP1R2P1Q96PQ5 205 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 NKIRAS1Q9NYS0 192 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 SMG5Q9UPR3 1016 aaKnown RBP15.8■□□□□ 0.12
SHOX2-202ENST00000425436 IKBKGQ9Y6K9 419 aa15.8■□□□□ 0.12
SHOX2-202ENST00000425436 A0A1W2PQF6 199 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 POC1B-GALNT4F8VUJ3 575 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 NPC1O15118 1278 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 SRCP12931 536 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 BRAFP15056 766 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 MAGEA3P43357 314 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 NRLP54845 237 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 DLG2Q15700 870 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 HSF5Q4G112 596 aaPredicted RBP15.79■□□□□ 0.12
SHOX2-202ENST00000425436 HP1BP3Q5SSJ5 553 aaPredicted RBP15.79■□□□□ 0.12
SHOX2-202ENST00000425436 LRRC8BQ6P9F7 803 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 CAND1Q86VP6 1230 aaKnown RBP15.79■□□□□ 0.12
SHOX2-202ENST00000425436 TAB3Q8N5C8 712 aaPredicted RBP15.79■□□□□ 0.12
SHOX2-202ENST00000425436 FBF1Q8TES7 1133 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 ALKBH8Q96BT7 664 aaKnown RBP15.79■□□□□ 0.12
SHOX2-202ENST00000425436 HHIPQ96QV1 700 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 GABRG3Q99928 467 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 DHRS4Q9BTZ2 278 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 SSU72Q9NP77 194 aaKnown RBP15.79■□□□□ 0.12
SHOX2-202ENST00000425436 ZC3H7BQ9UGR2 993 aaKnown RBP15.79■□□□□ 0.12
SHOX2-202ENST00000425436 IPO11Q9UI26 975 aaKnown RBP15.79■□□□□ 0.12
SHOX2-202ENST00000425436 SLC8A2Q9UPR5 921 aa15.79■□□□□ 0.12
SHOX2-202ENST00000425436 FCF1Q9Y324 198 aaKnown RBP15.79■□□□□ 0.12
SHOX2-202ENST00000425436 LAMTOR5O43504 91 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 BNIP3LO60238 219 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 SYNCRIPO60506 623 aaKnown RBP15.78■□□□□ 0.12
SHOX2-202ENST00000425436 KRT15P19012 456 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 CCNCP24863 283 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 SSTR1P30872 391 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 GARSP41250 739 aaKnown RBP15.78■□□□□ 0.12
SHOX2-202ENST00000425436 PXNP49023 591 aaPredicted RBP15.78■□□□□ 0.12
SHOX2-202ENST00000425436 CCR3P51677 355 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 WASHC5Q12768 1159 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms