RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 CSRP3P50461 194 aa26.7■■□□□ 1.86
LDB1-202ENST00000425280 SLC5A9Q2M3M2 681 aa26.7■■□□□ 1.86
LDB1-202ENST00000425280 RNF187Q5TA31 235 aaPredicted RBP26.7■■□□□ 1.86
LDB1-202ENST00000425280 APCDD1Q8J025 514 aa26.7■■□□□ 1.86
LDB1-202ENST00000425280 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP26.7■■□□□ 1.86
LDB1-202ENST00000425280 FBXO5Q9UKT4 447 aa26.7■■□□□ 1.86
LDB1-202ENST00000425280 MYO7AQ13402 2215 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 A0A096LPK6 155 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 KLF11O14901 512 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 BIRC5O15392 142 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 GSRP00390 522 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 BPGMP07738 259 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 ARSDP51689 593 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 IRX4P78413 519 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 FYB2Q5VWT5 728 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 BRSK1Q8TDC3 778 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 THOC1Q96FV9 657 aaKnown RBP26.69■■□□□ 1.86
LDB1-202ENST00000425280 TDRD1Q9BXT4 1180 aaKnown RBP26.69■■□□□ 1.86
LDB1-202ENST00000425280 ARIH1Q9Y4X5 557 aaPredicted RBP26.69■■□□□ 1.86
LDB1-202ENST00000425280 ARL5AQ9Y689 179 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 NOTCH4Q99466 2003 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 CCT8L1PA6NM43 557 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 PRLP01236 227 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 C2P06681 752 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 PIRTP0C851 137 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 AVPR1AP37288 418 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 C9orf50Q5SZB4 431 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 RNF43Q68DV7 783 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 NUDCD3Q8IVD9 361 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 RIN3Q8TB24 985 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 TSSK1BQ9BXA7 367 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 TASP1Q9H6P5 420 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 TMEM216Q9P0N5 145 aa26.69■■□□□ 1.86
LDB1-202ENST00000425280 CCL22O00626 93 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 SLC7A4O43246 635 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 CA3P07451 260 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 LAMB3Q13751 1172 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 ARHGAP15Q53QZ3 475 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 CCDC121Q6ZUS5 278 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 CLEC14AQ86T13 490 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 TRIM42Q8IWZ5 723 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 PLD6Q8N2A8 252 aaKnown RBP26.68■■□□□ 1.86
LDB1-202ENST00000425280 CALML6Q8TD86 181 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 CCT6BQ92526 530 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 HDAC10Q969S8 669 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 ZNF358Q9NW07 568 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 FCF1Q9Y324 198 aaKnown RBP26.68■■□□□ 1.86
LDB1-202ENST00000425280 PCDHGC4Q9Y5F7 938 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 RAI2Q9Y5P3 530 aa26.68■■□□□ 1.86
LDB1-202ENST00000425280 MT-CO1P00395 513 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 PROCP04070 461 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 GSTA1P08263 222 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 HNRNPA1P09651 372 aaKnown RBP eCLIP26.67■■□□□ 1.86
LDB1-202ENST00000425280 IRF9Q00978 393 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 ACVR1Q04771 509 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 NSUN2Q08J23 767 aaKnown RBP eCLIP26.67■■□□□ 1.86
LDB1-202ENST00000425280 LMAN2Q12907 356 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 KIAA0408Q6ZU52 694 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 MFSD6LQ8IWD5 586 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 OTUD6BQ8N6M0 293 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 USP13Q92995 863 aaPredicted RBP26.67■■□□□ 1.86
LDB1-202ENST00000425280 MFSD1Q9H3U5 465 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 PER2O15055 1255 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 CD151P48509 253 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 NTHL1P78549 312 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 USP10Q14694 798 aaKnown RBP26.67■■□□□ 1.86
LDB1-202ENST00000425280 NCEH1Q6PIU2 408 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 FIBINQ8TAL6 211 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 PEX13Q92968 403 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 E2F7Q96AV8 911 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 HTATIP2Q9BUP3 242 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 C2orf49Q9BVC5 232 aaPredicted RBP26.67■■□□□ 1.86
LDB1-202ENST00000425280 SPO11Q9Y5K1 396 aa26.67■■□□□ 1.86
LDB1-202ENST00000425280 HAUS5O94927 633 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 PDHA1P08559 390 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 RHOAP61586 193 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 PTPRCAPQ14761 206 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 CHI3L2Q15782 390 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 CES4AQ5XG92 561 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 PTAR1Q7Z6K3 402 aaPredicted RBP26.66■■□□□ 1.86
LDB1-202ENST00000425280 SLC41A1Q8IVJ1 513 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 OR6P1Q8NGX9 317 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 RMDN1Q96DB5 314 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 DNAJC1Q96KC8 554 aaKnown RBP26.66■■□□□ 1.86
LDB1-202ENST00000425280 FBXO6Q9NRD1 293 aaPredicted RBP26.66■■□□□ 1.86
LDB1-202ENST00000425280 KLHL14Q9P2G3 628 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 ANKRD36A6QL64 1941 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 CCDC195A0A1B0GUA6 201 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 FAM95CA0A1B0GW59 222 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 K7ERQ8 282 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 AURKAO14965 403 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 BUD23O43709 281 aaKnown RBP26.66■■□□□ 1.86
LDB1-202ENST00000425280 XYLBO75191 536 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 SAT1P21673 171 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 POLD2P49005 469 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 PRAMEP78395 509 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 PRSS36Q5K4E3 855 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 ZNF697Q5TEC3 545 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 TRPM8Q7Z2W7 1104 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 PLCD4Q9BRC7 762 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms