RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 PPP2CAP67775 309 aa14.95□□□□□ -0.02
TMEM248-204ENST00000424964 NIPAL4Q0D2K0 466 aa14.95□□□□□ -0.02
TMEM248-204ENST00000424964 KLF1Q13351 362 aaPredicted RBP14.95□□□□□ -0.02
TMEM248-204ENST00000424964 UGP2Q16851 508 aa14.95□□□□□ -0.02
TMEM248-204ENST00000424964 TEX44Q53QW1 395 aa14.95□□□□□ -0.02
TMEM248-204ENST00000424964 PRPF39Q86UA1 669 aaKnown RBP14.95□□□□□ -0.02
TMEM248-204ENST00000424964 SLC13A5Q86YT5 568 aaPredicted RBP14.95□□□□□ -0.02
TMEM248-204ENST00000424964 HTR3CQ8WXA8 447 aa14.95□□□□□ -0.02
TMEM248-204ENST00000424964 KLK6Q92876 244 aa14.95□□□□□ -0.02
TMEM248-204ENST00000424964 FEM1CQ96JP0 617 aa14.95□□□□□ -0.02
TMEM248-204ENST00000424964 SMOC1Q9H4F8 434 aa14.95□□□□□ -0.02
TMEM248-204ENST00000424964 TMEM74BQ9NUR3 256 aa14.95□□□□□ -0.02
TMEM248-204ENST00000424964 KLHL8Q9P2G9 620 aaPredicted RBP14.95□□□□□ -0.02
TMEM248-204ENST00000424964 ITM2BQ9Y287 266 aa14.95□□□□□ -0.02
TMEM248-204ENST00000424964 RAI2Q9Y5P3 530 aa14.95□□□□□ -0.02
TMEM248-204ENST00000424964 OTOGLQ3ZCN5 2332 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 A0A1W2PQ67 120 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 TRAFD1O14545 582 aaPredicted RBP14.94□□□□□ -0.02
TMEM248-204ENST00000424964 TSPAN6O43657 245 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 CEP104O60308 925 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 ITIH2P19823 946 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 CD27P26842 260 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 CD86P42081 329 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 SUOXP51687 545 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 WASHC5Q12768 1159 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 TRAF2Q12933 501 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 ARMC12Q5T9G4 340 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 ALG1LQ6GMV1 187 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 ERAP2Q6P179 960 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 PID1Q7Z2X4 250 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 TRIM69Q86WT6 500 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 HORMAD1Q86X24 394 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 ZSWIM9Q86XI8 627 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 ZCCHC9Q8N567 271 aaKnown RBP14.94□□□□□ -0.02
TMEM248-204ENST00000424964 ARRDC2Q8TBH0 407 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 ECHDC3Q96DC8 303 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 TEKT5Q96M29 485 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 VAT1Q99536 393 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 GLOD4Q9HC38 313 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 PCDH12Q9NPG4 1184 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 VPS45Q9NRW7 570 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 SUSD2Q9UGT4 822 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 TPX2Q9ULW0 747 aaKnown RBP14.94□□□□□ -0.02
TMEM248-204ENST00000424964 PCDHB9Q9Y5E1 797 aa14.94□□□□□ -0.02
TMEM248-204ENST00000424964 ZFHX2Q9C0A1 2572 aaPredicted RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 PTPRZ1P23471 2315 aaPredicted RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 USP34Q70CQ2 3546 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 MYO15AQ9UKN7 3530 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 A0A1W2PPC4 97 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 AREL1O15033 823 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 KHNYNO15037 678 aaKnown RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 BCAT2O15382 392 aaPredicted RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 KCNN4O15554 427 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 HTRA2O43464 458 aaPredicted RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 LRP3O75074 770 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 STK10O94804 968 aaKnown RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 CPP00450 1065 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 PRKCGP05129 697 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 CFIP05156 583 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 CA4P22748 312 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 HOXD12P35452 270 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 RPS21P63220 83 aaKnown RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 FAM193AP78312 1265 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 ELP6Q0PNE2 266 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 DUOXA1Q1HG43 343 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 SETMARQ53H47 684 aaPredicted RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 PLA2G2CQ5R387 149 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 KIAA1161Q6NSJ0 714 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 RABEPKQ7Z6M1 372 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 ZNF567Q8N184 647 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 C12orf50Q8NA57 414 aaPredicted RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 CEP76Q8TAP6 659 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 CXorf40AQ8TE69 158 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 RBM15Q96T37 977 aaKnown RBP eCLIP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 WRAP53Q9BUR4 548 aaKnown RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 SLC25A51Q9H1U9 297 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 SEMA4GQ9NTN9 838 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 GGT7Q9UJ14 662 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 TRHDEQ9UKU6 1024 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 PHTF1Q9UMS5 762 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 ZFR2Q9UPR6 939 aaKnown RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 CHKBQ9Y259 395 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 R3HDM2Q9Y2K5 976 aaKnown RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 FAM186AA6NE01 2351 aa14.93□□□□□ -0.02
TMEM248-204ENST00000424964 RIF1Q5UIP0 2472 aaKnown RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 EP300Q09472 2414 aaPredicted RBP14.93□□□□□ -0.02
TMEM248-204ENST00000424964 A0A1B0GTW7 788 aa14.92□□□□□ -0.02
TMEM248-204ENST00000424964 IGLON5A6NGN9 336 aa14.92□□□□□ -0.02
TMEM248-204ENST00000424964 PATE3B3GLJ2 98 aa14.92□□□□□ -0.02
TMEM248-204ENST00000424964 RIOK3O14730 519 aaKnown RBP14.92□□□□□ -0.02
TMEM248-204ENST00000424964 SLC31A1O15431 190 aa14.92□□□□□ -0.02
TMEM248-204ENST00000424964 SPINT1O43278 529 aa14.92□□□□□ -0.02
TMEM248-204ENST00000424964 LATO43561 262 aa14.92□□□□□ -0.02
TMEM248-204ENST00000424964 ZNF189O75820 626 aaPredicted RBP14.92□□□□□ -0.02
TMEM248-204ENST00000424964 PGLSO95336 258 aa14.92□□□□□ -0.02
TMEM248-204ENST00000424964 ATP1A1P05023 1023 aaKnown RBP14.92□□□□□ -0.02
TMEM248-204ENST00000424964 MMP2P08253 660 aa14.92□□□□□ -0.02
TMEM248-204ENST00000424964 ZNF806P0C7X5 589 aa14.92□□□□□ -0.02
TMEM248-204ENST00000424964 PRLRP16471 622 aa14.92□□□□□ -0.02
TMEM248-204ENST00000424964 NFKBIAP25963 317 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms