RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 GIPC1O14908 333 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ZNF883P0CG24 379 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 CSRP1P21291 193 aaKnown RBP22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 CCT8P50990 548 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 NAP1L1P55209 391 aaKnown RBP22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 NXPH1P58417 271 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 DYNLT1P63172 113 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 IL9RQ01113 521 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ELP6Q0PNE2 266 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SLC10A2Q12908 348 aaPredicted RBP22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SGCGQ13326 291 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 UGP2Q16851 508 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ZNF423Q2M1K9 1284 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SLC9A4Q6AI14 798 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 MFSD7Q6UXD7 560 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 CXorf40AQ8TE69 158 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 NSMCE3Q96MG7 304 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 NUDCD1Q96RS6 583 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 DESI2Q9BSY9 194 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 WRAP53Q9BUR4 548 aaKnown RBP22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 LACRTQ9GZZ8 138 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SLC32A1Q9H598 525 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 PCDH12Q9NPG4 1184 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 HEY1Q9Y5J3 304 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 DUSP10Q9Y6W6 482 aa22.53■■□□□ 1.2
PTCHD3P2-201ENST00000424937 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 MMP20O60882 483 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 PAK4O96013 591 aaPredicted RBP22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 PRKCGP05129 697 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 CR2P20023 1033 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 MARCKSL1P49006 195 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 SUOXP51687 545 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 CLDN2P57739 230 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ERAP2Q6P179 960 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 GCNT7Q6ZNI0 430 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 PIP4P1Q86T03 277 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 NAXDQ8IW45 347 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TEX26Q8N6G2 289 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 CCNYQ8ND76 341 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 HDAC11Q96DB2 347 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ECHDC3Q96DC8 303 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 TSGA13Q96PP4 275 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ELF4Q99607 663 aaPredicted RBP22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 ATP8A1Q9Y2Q0 1164 aa22.52■■□□□ 1.2
PTCHD3P2-201ENST00000424937 BTNL10A8MVZ5 291 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 MATN3O15232 486 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 SH3BP5O60239 455 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 MAGEC1O60732 1142 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 NEBLO76041 1014 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 ZFXP17010 805 aaPredicted RBP22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 CCNCP24863 283 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 GSDMDP57764 484 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 ITKQ08881 620 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 OVGP1Q12889 678 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 HNRNPDQ14103 355 aaKnown RBP22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 PRAMEF14Q5SWL7 426 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 NPNTQ6UXI9 565 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 PTAR1Q7Z6K3 402 aaPredicted RBP22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 MAML1Q92585 1016 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 KLHDC7BQ96G42 594 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 CALR3Q96L12 384 aaKnown RBP22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 C1QTNF2Q9BXJ5 285 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 NOD2Q9HC29 1040 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 TTLL3Q9Y4R7 772 aa22.51■■□□□ 1.19
PTCHD3P2-201ENST00000424937 A6NNZ2 444 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 TRAFD1O14545 582 aaPredicted RBP22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 RAD51BO15315 384 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 PJA2O43164 708 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 DFNA5O60443 496 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 SOCS5O75159 536 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 TM7SF2O76062 418 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 THEGLP0DJG4 465 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 CEACAM1P13688 526 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 MMP12P39900 470 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 CDKN2BP42772 138 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 SEMG2Q02383 582 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 LLGL1Q15334 1064 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 KAZNQ674X7 775 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 SPOCD1Q6ZMY3 1216 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 SPATS2Q86XZ4 545 aaKnown RBP22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 CCDC50Q8IVM0 306 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 CCDC13Q8IYE1 715 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 KATNAL2Q8IYT4 538 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 OR13H1Q8NG92 308 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 SETD7Q8WTS6 366 aaKnown RBP22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 PDCD6IPQ8WUM4 868 aaKnown RBP22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 KRT35Q92764 455 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 FATE1Q969F0 183 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 CAMK1GQ96NX5 476 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 LGMNQ99538 433 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 POLR1EQ9GZS1 481 aaKnown RBP22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 PCDHGC4Q9Y5F7 938 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 PCDHGB2Q9Y5G2 931 aa22.5■■□□□ 1.19
PTCHD3P2-201ENST00000424937 A0A1B0GTQ1 180 aa22.49■■□□□ 1.19
PTCHD3P2-201ENST00000424937 RIOK3O14730 519 aaKnown RBP22.49■■□□□ 1.19
PTCHD3P2-201ENST00000424937 KRT10P13645 584 aa22.49■■□□□ 1.19
PTCHD3P2-201ENST00000424937 CCNB1P14635 433 aa22.49■■□□□ 1.19
PTCHD3P2-201ENST00000424937 PPIDQ08752 370 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms