RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CYP4A22Q5TCH4 519 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 CDC73Q6P1J9 531 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 KLC3Q6P597 504 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 ZNF365Q70YC5 407 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 MARK2Q7KZI7 788 aaKnown RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 ZNF627Q7L945 461 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 RRM2BQ7LG56 351 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 SPATA19Q7Z5L4 167 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 ARHGAP12Q8IWW6 846 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 UNC5BQ8IZJ1 945 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 FSTL5Q8N475 847 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 PDCL2Q8N4E4 241 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 ARL14Q8N4G2 192 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 IL17RCQ8NAC3 791 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 SLC4A11Q8NBS3 891 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 MDGA1Q8NFP4 955 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 KLHL29Q96CT2 875 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 TMCO6Q96DC7 493 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 SPACA9Q96E40 222 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 ELP4Q96EB1 424 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 RMDN2Q96LZ7 410 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 C5orf34Q96MH7 638 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 CAMK1GQ96NX5 476 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 UHRF1Q96T88 793 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 MNTQ99583 582 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 SYT17Q9BSW7 474 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 HERC2P3Q9BVR0 1158 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 NFKBIZQ9BYH8 718 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 TRIM31Q9BZY9 425 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 MS4A7Q9GZW8 240 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 WNT5BQ9H1J7 359 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 NRDE2Q9H7Z3 1164 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 PCDHB16Q9NRJ7 776 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 HOMER3Q9NSC5 361 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 IARS2Q9NSE4 1012 aaKnown RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 TMEM140Q9NV12 185 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 GDAP2Q9NXN4 497 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 TMOD2Q9NZR1 351 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 CNIH4Q9P003 139 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 CFAP97Q9P2B7 532 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 TRPC4Q9UBN4 977 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 TLK1Q9UKI8 766 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 MTMR6Q9Y217 621 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 OSGIN2Q9Y236 505 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 PTRH2Q9Y3E5 179 aaKnown RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 PCDHGA5Q9Y5G8 931 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 ENTPD2Q9Y5L3 495 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 SNX9Q9Y5X1 595 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 DDX49Q9Y6V7 483 aaKnown RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 XDHP47989 1333 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 FAM205AQ6ZU69 1335 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 ZNF644Q9H582 1327 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 OR2A25A4D2G3 310 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 EME2A4GXA9 379 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 HTR3EA5X5Y0 456 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 LRRC72A6NJI9 287 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 KPNA7A9QM74 516 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 CXCL11O14625 94 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 CETN3O15182 167 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 POLR2DO15514 142 aaKnown RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 NUDT21O43809 227 aaKnown RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 FAM20BO75063 409 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 SPAG6O75602 509 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 RPP40O75818 363 aaKnown RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 UNC5CO95185 931 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 GRPP07492 148 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 LTA4HP09960 611 aaKnown RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 UROSP10746 265 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 PRLRP16471 622 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 DDCP20711 480 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 CDH3P22223 829 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 JAK1P23458 1154 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 CCND2P30279 289 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 SOAT1P35610 550 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 HSD17B2P37059 387 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 PBX3P40426 434 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 CASRP41180 1078 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 PNPLA4P41247 253 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 FASLGP48023 281 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 CCR3P51677 355 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 PTTG1IPP53801 180 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 VCPP55072 806 aaKnown RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 TRA2BP62995 288 aaKnown RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 GOLGA8FQ08AF8 430 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 TRDNQ13061 729 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 IDI1Q13907 227 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 DPYSQ14117 519 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 BOP1Q14137 746 aaKnown RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 DPCR1Q3MIW9 517 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 AMOTQ4VCS5 1084 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 LRRC24Q50LG9 513 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 RABL3Q5HYI8 236 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 TCTE1Q5JU00 501 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 C1QL3Q5VWW1 255 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 DPY19L2P1Q6NXN4 242 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 AFTPHQ6ULP2 937 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 MFSD7Q6UXD7 560 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 SLC36A4Q6YBV0 504 aa3.79□□□□□ -1.8
SF3B1-205ENST00000424674 PARS2Q7L3T8 475 aaKnown RBP3.79□□□□□ -1.8
SF3B1-205ENST00000424674 TAS2R42Q7RTR8 314 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms