RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 GTF3C2Q8WUA4 911 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-204ENST00000424143 L3HYPDHQ96EM0 354 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 DNAJC1Q96KC8 554 aaKnown RBP15.35■□□□□ 0.05
C9orf3-204ENST00000424143 OSBPL6Q9BZF3 934 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 TRPV6Q9H1D0 765 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 TUT1Q9H6E5 874 aaKnown RBP15.35■□□□□ 0.05
C9orf3-204ENST00000424143 FNIP2Q9P278 1114 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 CNOT6Q9ULM6 557 aaKnown RBP15.35■□□□□ 0.05
C9orf3-204ENST00000424143 FZD1Q9UP38 647 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 NDUFAF1Q9Y375 327 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 GJA3Q9Y6H8 435 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 MRASO14807 208 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 PEX10O60683 326 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 GPR32O75388 356 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 GPC4O75487 556 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 PAPSS2O95340 614 aaPredicted RBP15.34■□□□□ 0.05
C9orf3-204ENST00000424143 JCHAINP01591 159 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 FCGR1AP12314 374 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 ARNTP27540 789 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 NFKB2Q00653 900 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 PRKCQQ04759 706 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 NME3Q13232 169 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 ACAP2Q15057 778 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 AGKQ53H12 422 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 HMBOX1Q6NT76 420 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 PAOXQ6QHF9 649 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 Q6ZNX1 250 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 LARP4Q71RC2 724 aaKnown RBP eCLIP15.34■□□□□ 0.05
C9orf3-204ENST00000424143 CEP97Q8IW35 865 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 MINDY1Q8N5J2 469 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 CCNYL1Q8N7R7 359 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 RNF169Q8NCN4 708 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 HEXDCQ8WVB3 486 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 FATE1Q969F0 183 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 FEM1CQ96JP0 617 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 TRIM62Q9BVG3 475 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 COLEC11Q9BWP8 271 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 EIF2AQ9BY44 585 aaKnown RBP15.34■□□□□ 0.05
C9orf3-204ENST00000424143 CXCL16Q9H2A7 254 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 POMKQ9H5K3 350 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 ARNT2Q9HBZ2 717 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 GLOD4Q9HC38 313 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 TMPRSS4Q9NRS4 437 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 FAIMQ9NVQ4 179 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 TMEM45AQ9NWC5 275 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 G3BP2Q9UN86 482 aaKnown RBP15.34■□□□□ 0.05
C9orf3-204ENST00000424143 ZNF510Q9Y2H8 683 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 PTCH2Q9Y6C5 1203 aa15.34■□□□□ 0.05
C9orf3-204ENST00000424143 OTOFQ9HC10 1997 aa15.33■□□□□ 0.05
C9orf3-204ENST00000424143 AKAP10O43572 662 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 HCRTO43612 131 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 TRPA1O75762 1119 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 WISP3O95389 354 aaPredicted RBP15.33■□□□□ 0.04
C9orf3-204ENST00000424143 FGF4P08620 206 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 LTA4HP09960 611 aaKnown RBP15.33■□□□□ 0.04
C9orf3-204ENST00000424143 DARSP14868 501 aaKnown RBP15.33■□□□□ 0.04
C9orf3-204ENST00000424143 HOXB8P17481 243 aaPredicted RBP15.33■□□□□ 0.04
C9orf3-204ENST00000424143 IMPDH1P20839 514 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 HOXC13P31276 330 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 MSX2P35548 267 aaPredicted RBP15.33■□□□□ 0.04
C9orf3-204ENST00000424143 ABCG1P45844 678 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 GLRBP48167 497 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 LILRA4P59901 499 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 ATP6V0D1P61421 351 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 SPIDRQ14159 915 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 LCN8Q6JVE9 175 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 GPR141Q7Z602 305 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 ZNF354CQ86Y25 554 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 MFSD6LQ8IWD5 586 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 RNF148Q8N7C7 305 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 ADAM32Q8TC27 787 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 TRPM4Q8TD43 1214 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 UBXN10Q96LJ8 280 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 SLC29A1Q99808 456 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 C9orf16Q9BUW7 83 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 HIPK3Q9H422 1215 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 GPRC5DQ9NZD1 345 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 TMEM9Q9P0T7 183 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 GJD2Q9UKL4 321 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 FBXO5Q9UKT4 447 aa15.33■□□□□ 0.04
C9orf3-204ENST00000424143 MAGED2Q9UNF1 606 aaPredicted RBP15.33■□□□□ 0.04
C9orf3-204ENST00000424143 SMIM35A0A1B0GVV1 85 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 I6L893 689 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-204ENST00000424143 NRP1O14786 923 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 TPH1P17752 444 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 LEPRP48357 1165 aaKnown RBP15.32■□□□□ 0.04
C9orf3-204ENST00000424143 SLC12A2P55011 1212 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 NAA20P61599 178 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 SFSWAPQ12872 951 aaKnown RBP15.32■□□□□ 0.04
C9orf3-204ENST00000424143 GRIK2Q13002 908 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 INPP5AQ14642 412 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 ZNF792Q3KQV3 632 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 BTBD8Q5XKL5 378 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 OLFML2BQ68BL8 750 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 SPRED1Q7Z699 444 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 ZNF554Q86TJ5 538 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 CUZD1Q86UP6 607 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 GPR180Q86V85 440 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 TMEM86AQ8N2M4 240 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 PCDH20Q8N6Y1 951 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms