RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 GGT7Q9UJ14 662 aa9.78□□□□□ -0.84
HERC3-204ENST00000422770 SNX12Q9UMY4 172 aa9.78□□□□□ -0.84
HERC3-204ENST00000422770 CA5BQ9Y2D0 317 aa9.78□□□□□ -0.84
HERC3-204ENST00000422770 ANKRD6Q9Y2G4 727 aa9.78□□□□□ -0.84
HERC3-204ENST00000422770 MAFKO60675 156 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 GJB3O75712 270 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 TUBB4AP04350 444 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 PRKCGP05129 697 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 KRT10P13645 584 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 MX2P20592 715 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 IL4RP24394 825 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 CD38P28907 300 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 AKT2P31751 481 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 RWDD2BP57060 319 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 AP1S1P61966 158 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 RACK1P63244 317 aaKnown RBP9.77□□□□□ -0.85
HERC3-204ENST00000422770 FAM193AP78312 1265 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 IL9RQ01113 521 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 SEMG2Q02383 582 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 GBE1Q04446 702 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 GALNT2Q10471 571 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 PAFAH1B3Q15102 231 aaKnown RBP9.77□□□□□ -0.85
HERC3-204ENST00000422770 LRRC38Q5VT99 294 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 KIAA1161Q6NSJ0 714 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 ERAP2Q6P179 960 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 IL27RAQ6UWB1 636 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 MFSD7Q6UXD7 560 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 NPNTQ6UXI9 565 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 PTAR1Q7Z6K3 402 aaPredicted RBP9.77□□□□□ -0.85
HERC3-204ENST00000422770 PQLC3Q8N755 202 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 FAM71BQ8TC56 605 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 ALG3Q92685 438 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 RAB7BQ96AH8 199 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 HAUS1Q96CS2 278 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 HES6Q96HZ4 224 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 RBM41Q96IZ5 413 aaKnown RBP9.77□□□□□ -0.85
HERC3-204ENST00000422770 ZNF599Q96NL3 588 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 OSBPL9Q96SU4 736 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 CPEB1Q9BZB8 566 aaKnown RBP9.77□□□□□ -0.85
HERC3-204ENST00000422770 ZDHHC5Q9C0B5 715 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 SUV39H2Q9H5I1 410 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 EBF2Q9HAK2 575 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 SMARCAL1Q9NZC9 954 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 TPX2Q9ULW0 747 aaKnown RBP9.77□□□□□ -0.85
HERC3-204ENST00000422770 FADS3Q9Y5Q0 445 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 SNX11Q9Y5W9 270 aa9.77□□□□□ -0.85
HERC3-204ENST00000422770 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.76□□□□□ -0.85
HERC3-204ENST00000422770 IGLON5A6NGN9 336 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 GOLGA8CPA6NN73 597 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 A8MX80 341 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 UPK3BL1B0FP48 263 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 UPK3BL2E5RIL1 263 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 PRAMEF26H0Y7S4 382 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 CDX4O14627 284 aaPredicted RBP9.76□□□□□ -0.85
HERC3-204ENST00000422770 MUSKO15146 869 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 TSPAN6O43657 245 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 CEP104O60308 925 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 CST8O60676 142 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 MMP20O60882 483 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 ZRANB2O95218 330 aaKnown RBP eCLIP9.76□□□□□ -0.85
HERC3-204ENST00000422770 C7P10643 843 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 ZFXP17010 805 aaPredicted RBP9.76□□□□□ -0.85
HERC3-204ENST00000422770 TCP1P17987 556 aaKnown RBP9.76□□□□□ -0.85
HERC3-204ENST00000422770 ITIH2P19823 946 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 HNRNPA2B1P22626 353 aaKnown RBP9.76□□□□□ -0.85
HERC3-204ENST00000422770 NUDT1P36639 197 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 HSPA9P38646 679 aaKnown RBP9.76□□□□□ -0.85
HERC3-204ENST00000422770 CETN2P41208 172 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 NOVA1P51513 510 aaKnown RBP9.76□□□□□ -0.85
HERC3-204ENST00000422770 LIMK1P53667 647 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 CLDN2P57739 230 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 RPS21P63220 83 aaKnown RBP9.76□□□□□ -0.85
HERC3-204ENST00000422770 ELP6Q0PNE2 266 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 TFDP2Q14188 446 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 KIF19Q2TAC6 998 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 ZNF284Q2VY69 593 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 HLA-BQ31612 363 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 PPM1JQ5JR12 505 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 DENND2CQ68D51 928 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 AADACL2Q6P093 401 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 NEK5Q6P3R8 708 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 BRAT1Q6PJG6 821 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 SPOCD1Q6ZMY3 1216 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 B4GALNT4Q76KP1 1039 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 LRRC49Q8IUZ0 686 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 CCDC13Q8IYE1 715 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 KATNAL2Q8IYT4 538 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 PGBD5Q8N414 524 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 PLD5Q8N7P1 536 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 SETD7Q8WTS6 366 aaKnown RBP9.76□□□□□ -0.85
HERC3-204ENST00000422770 FAF2Q96CS3 445 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 ZNF641Q96N77 438 aaPredicted RBP9.76□□□□□ -0.85
HERC3-204ENST00000422770 PSKH2Q96QS6 385 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 TUBGCP5Q96RT8 1024 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 LGMNQ99538 433 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 CEP41Q9BYV8 373 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 IL21RQ9HBE5 538 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 RBM22Q9NW64 420 aaKnown RBP eCLIP9.76□□□□□ -0.85
HERC3-204ENST00000422770 DTLQ9NZJ0 730 aa9.76□□□□□ -0.85
HERC3-204ENST00000422770 ZFR2Q9UPR6 939 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms