RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 SLC25A51Q9H1U9 297 aa23.28■■□□□ 1.32
LSM8-203ENST00000422760 VCX3BQ9H321 246 aa23.28■■□□□ 1.32
LSM8-203ENST00000422760 SLC7A8Q9UHI5 535 aa23.28■■□□□ 1.32
LSM8-203ENST00000422760 OBSL1O75147 1896 aa23.28■■□□□ 1.32
LSM8-203ENST00000422760 TRIM13O60858 407 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 BAIAP3O94812 1187 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 ADSLP30566 484 aaPredicted RBP23.27■■□□□ 1.32
LSM8-203ENST00000422760 CPA2P48052 419 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 BTKQ06187 659 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 ASPHQ12797 758 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 SERINC3Q13530 473 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 DENND1CQ8IV53 801 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 NR1H4Q96RI1 486 aaPredicted RBP23.27■■□□□ 1.32
LSM8-203ENST00000422760 KIFC1Q9BW19 673 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 ENTPD7Q9NQZ7 604 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 MRPL17Q9NRX2 175 aaKnown RBP23.27■■□□□ 1.32
LSM8-203ENST00000422760 NDE1Q9NXR1 346 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.27■■□□□ 1.32
LSM8-203ENST00000422760 A0A096LPK6 155 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 CARNS1A5YM72 827 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 SLCO1B7G3V0H7 640 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 ZNF195O14628 629 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 STC2O76061 302 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 NMBRP28336 390 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 PPM1AP35813 382 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 ACVRL1P37023 503 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 YBEYP58557 167 aaPredicted RBP23.27■■□□□ 1.32
LSM8-203ENST00000422760 MAXP61244 160 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 IL10RBQ08334 325 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 CFAP157Q5JU67 520 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 KCNMB4Q86W47 210 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 ACTRT2Q8TDY3 377 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 CCDC28BQ9BUN5 200 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 CDH19Q9H159 772 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 MRGBPQ9NV56 204 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 INSL5Q9Y5Q6 135 aa23.27■■□□□ 1.32
LSM8-203ENST00000422760 C2orf78A6NCI8 922 aa23.26■■□□□ 1.31
LSM8-203ENST00000422760 TOP3BO95985 862 aaKnown RBP23.26■■□□□ 1.31
LSM8-203ENST00000422760 ANPEPP15144 967 aa23.26■■□□□ 1.31
LSM8-203ENST00000422760 SESN3P58005 492 aa23.26■■□□□ 1.31
LSM8-203ENST00000422760 XIAPP98170 497 aa23.26■■□□□ 1.31
LSM8-203ENST00000422760 UBAP2LQ14157 1087 aaKnown RBP23.26■■□□□ 1.31
LSM8-203ENST00000422760 POU6F1Q14863 301 aa23.26■■□□□ 1.31
LSM8-203ENST00000422760 KDELC1Q6UW63 502 aa23.26■■□□□ 1.31
LSM8-203ENST00000422760 TCEAL8Q8IYN2 117 aa23.26■■□□□ 1.31
LSM8-203ENST00000422760 TEX26Q8N6G2 289 aa23.26■■□□□ 1.31
LSM8-203ENST00000422760 IMP4Q96G21 291 aaKnown RBP23.26■■□□□ 1.31
LSM8-203ENST00000422760 PRICKLE1Q96MT3 831 aaPredicted RBP23.26■■□□□ 1.31
LSM8-203ENST00000422760 PANX3Q96QZ0 392 aa23.26■■□□□ 1.31
LSM8-203ENST00000422760 RNF38Q9H0F5 515 aa23.26■■□□□ 1.31
LSM8-203ENST00000422760 CCDC78A2IDD5 438 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 TEX28O15482 410 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 LYPLA1O75608 230 aaPredicted RBP23.25■■□□□ 1.31
LSM8-203ENST00000422760 HSPA4LO95757 839 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 KLKB1P03952 638 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 NUMBP49757 651 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 CSRP3P50461 194 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 ITGA9Q13797 1035 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 PCSK7Q16549 785 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 HSP90AA5PQ58FG0 334 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 PCID2Q5JVF3 399 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 EPGNQ6UW88 154 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 SETD3Q86TU7 594 aaPredicted RBP23.25■■□□□ 1.31
LSM8-203ENST00000422760 NRG4Q8WWG1 115 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 AGAP2Q99490 1192 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 GPR22Q99680 433 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 ATXN3LQ9H3M9 355 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 RHOJQ9H4E5 214 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 NMRAL1Q9HBL8 299 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 GKN1Q9NS71 199 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 C20orf96Q9NUD7 363 aaPredicted RBP23.25■■□□□ 1.31
LSM8-203ENST00000422760 ZFP37Q9Y6Q3 630 aaPredicted RBP23.25■■□□□ 1.31
LSM8-203ENST00000422760 A0A088AWK7 358 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 CORO1AP31146 461 aaKnown RBP23.25■■□□□ 1.31
LSM8-203ENST00000422760 WNT3AP56704 352 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 TNK2Q07912 1038 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 ITKQ08881 620 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 PGM2L1Q6PCE3 622 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 RANBP10Q6VN20 620 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 KDELC2Q7Z4H8 507 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 DNAJB7Q7Z6W7 309 aaPredicted RBP23.25■■□□□ 1.31
LSM8-203ENST00000422760 MRM3Q9HC36 420 aaKnown RBP23.25■■□□□ 1.31
LSM8-203ENST00000422760 TLK1Q9UKI8 766 aa23.25■■□□□ 1.31
LSM8-203ENST00000422760 IRF1P10914 325 aa23.24■■□□□ 1.31
LSM8-203ENST00000422760 CD86P42081 329 aa23.24■■□□□ 1.31
LSM8-203ENST00000422760 CHRNA4P43681 627 aa23.24■■□□□ 1.31
LSM8-203ENST00000422760 RPS24P62847 133 aaKnown RBP23.24■■□□□ 1.31
LSM8-203ENST00000422760 DSC2Q02487 901 aa23.24■■□□□ 1.31
LSM8-203ENST00000422760 PPM1JQ5JR12 505 aa23.24■■□□□ 1.31
LSM8-203ENST00000422760 PKN3Q6P5Z2 889 aa23.24■■□□□ 1.31
LSM8-203ENST00000422760 TMEM150AQ86TG1 271 aa23.24■■□□□ 1.31
LSM8-203ENST00000422760 PPHLN1Q8NEY8 458 aaKnown RBP23.24■■□□□ 1.31
LSM8-203ENST00000422760 SPDL1Q96EA4 605 aa23.24■■□□□ 1.31
LSM8-203ENST00000422760 FAM167BQ9BTA0 163 aa23.24■■□□□ 1.31
LSM8-203ENST00000422760 ILKAPQ9H0C8 392 aaPredicted RBP23.24■■□□□ 1.31
LSM8-203ENST00000422760 IL23AQ9NPF7 189 aa23.24■■□□□ 1.31
LSM8-203ENST00000422760 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.24■■□□□ 1.311e-6■□□□□ 8.1
LSM8-203ENST00000422760 VPS45Q9NRW7 570 aa23.24■■□□□ 1.31
LSM8-203ENST00000422760 VTI1BQ9UEU0 232 aa23.24■■□□□ 1.31
LSM8-203ENST00000422760 SCOCQ9UIL1 159 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms