RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 SERPINA4P29622 427 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 CD68P34810 354 aaPredicted RBP9.36□□□□□ -0.91
PDGFC-202ENST00000422544 CD86P42081 329 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 NEK3P51956 506 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 ADPRHP54922 357 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 GDF10P55107 478 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 SKOR1P84550 965 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 RPL6Q02878 288 aaKnown RBP9.36□□□□□ -0.91
PDGFC-202ENST00000422544 TRAF2Q12933 501 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 CCNG2Q16589 344 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 LPAL2Q16609 132 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 RALGPS1Q5JS13 557 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 LRRC73Q5JTD7 316 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 CFAP58Q5T655 872 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 PIP5KL1Q5T9C9 394 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 AGBL4Q5VU57 503 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 ALG1LQ6GMV1 187 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 SLC36A4Q6YBV0 504 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 NYAP1Q6ZVC0 841 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 PARS2Q7L3T8 475 aaKnown RBP9.36□□□□□ -0.91
PDGFC-202ENST00000422544 ZSWIM9Q86XI8 627 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 TMEFF1Q8IYR6 380 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 PAF1Q8N7H5 531 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 PRELID2Q8N945 189 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 CCDC110Q8TBZ0 833 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 ACTRT1Q8TDG2 376 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 PDCD6IPQ8WUM4 868 aaKnown RBP9.36□□□□□ -0.91
PDGFC-202ENST00000422544 FAM131CQ96AQ9 280 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 PPP1R16AQ96I34 528 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 CAPZA3Q96KX2 299 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 C16orf45Q96MC5 204 aaPredicted RBP9.36□□□□□ -0.91
PDGFC-202ENST00000422544 RBM15Q96T37 977 aaKnown RBP eCLIP9.36□□□□□ -0.91
PDGFC-202ENST00000422544 VAT1Q99536 393 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 FERMT1Q9BQL6 677 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 TMEM121Q9BTD3 319 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 AP1M1Q9BXS5 423 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 FRMD8P1Q9BZ68 369 aaPredicted RBP9.36□□□□□ -0.91
PDGFC-202ENST00000422544 SLC25A51Q9H1U9 297 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 SGK2Q9HBY8 427 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 GLOD4Q9HC38 313 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 DKK3Q9UBP4 350 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 TRHDEQ9UKU6 1024 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 TTC7AQ9ULT0 858 aaPredicted RBP9.36□□□□□ -0.91
PDGFC-202ENST00000422544 FZD4Q9ULV1 537 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 ZNF148Q9UQR1 794 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 RAI2Q9Y5P3 530 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 SAR1BQ9Y6B6 198 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 SDK1Q7Z5N4 2213 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 TBC1D3DA0A087WVF3 549 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 TBC1D3IA0A087WXS9 549 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 TBC1D3EA0A087X179 549 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 TBC1D3KA0A087X1G2 549 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 TSPAN11A1L157 253 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 TBC1D3FA6NER0 549 aaPredicted RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 C5orf60A6NFR6 353 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 TBC1D3LB9A6J9 549 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 PGRMC1O00264 195 aaKnown RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 SLC7A4O43246 635 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 HTRA2O43464 458 aaPredicted RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 PLRG1O43660 514 aaKnown RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 SOCS5O75159 536 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 STK10O94804 968 aaKnown RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 PGLSO95336 258 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 SEMA4FO95754 770 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 PRKCGP05129 697 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 SERPINF2P08697 491 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 TBC1D3HP0C7X1 549 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 IGF2RP11717 2491 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 ADRB3P13945 408 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 NFKB1P19838 968 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 XPAP23025 273 aaPredicted RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 ABL2P42684 1182 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 KCNJ1P48048 391 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 TAS2R38P59533 333 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 SEMG2Q02383 582 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 CCDC15Q0P6D6 951 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 PDAP1Q13442 181 aaKnown RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 OASLQ15646 514 aaKnown RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 UGP2Q16851 508 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 PLK5Q496M5 336 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 ANKRD20A2Q5SQ80 823 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 ANKRD20A1Q5TYW2 823 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 ANKRD20A3Q5VUR7 823 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 TBC1D3GQ6DHY5 549 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 TBC1D3CQ6IPX1 549 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 ARMCX6Q7L4S7 300 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 LPCAT2Q7L5N7 544 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 KDELC2Q7Z4H8 507 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 PRUNE1Q86TP1 453 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 PRPF39Q86UA1 669 aaKnown RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 C11orf74Q86VG3 221 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 CREG2Q8IUH2 290 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 TBC1D3Q8IZP1 549 aaPredicted RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 SPATA22Q8NHS9 363 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 HCAR2Q8TDS4 363 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 ECHDC3Q96DC8 303 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 IMP4Q96G21 291 aaKnown RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 SPATA13Q96N96 652 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 NAP1L3Q99457 506 aaPredicted RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 DUSP15Q9H1R2 295 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms