RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ELOVL2Q9NXB9 296 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 INSL5Q9Y5Q6 135 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 LIASO43766 372 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 KCNA5P22460 613 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 AP1S1P61966 158 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 UBE3AQ05086 875 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 ARID3BQ8IVW6 561 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-206ENST00000421141 KLHL23Q8NBE8 558 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 FNIP1Q8TF40 1166 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 CERS2Q96G23 380 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 SPAM1P38567 509 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 JAG1P78504 1218 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 SF1Q15637 639 aaKnown RBP10.81□□□□□ -0.68
PTCH1-206ENST00000421141 CYB5D1Q6P9G0 228 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 FBXO25Q8TCJ0 367 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 FUCA2Q9BTY2 467 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 FAIM2Q9BWQ8 316 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 DOCK5Q9H7D0 1870 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 FPGTO14772 594 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 SEC22BO75396 215 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 RB1P06400 928 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 ABCB1P08183 1280 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-206ENST00000421141 ASPAP45381 313 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 DHPSP49366 369 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-206ENST00000421141 ABRQ12979 859 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 MAGEB18Q96M61 343 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 OSBPL1AQ9BXW6 950 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 SUFUQ9UMX1 484 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 TTC3P53804 2025 aa10.81□□□□□ -0.68
PTCH1-206ENST00000421141 ERN1O75460 977 aaKnown RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 RFTN1Q14699 578 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 PLA2G4EQ3MJ16 856 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 TMCO5AQ8N6Q1 288 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 TTLL2Q9BWV7 592 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 GLYATL1P3A0A0U1RQE8 302 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 SLC31A1O15431 190 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 INSIG1O15503 277 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 L1CAMP32004 1257 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 ILF3Q12906 894 aaKnown RBP eCLIP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 STK32AQ8WU08 396 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 CCDC90BQ9GZT6 254 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 RAD21L1Q9H4I0 556 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 STOML1Q9UBI4 398 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 FBXW11Q9UKB1 542 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 hCG_1818297A0A087WSY0 165 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 PIRTP0C851 137 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 SERPINB5P36952 375 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 COPAP53621 1224 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 GHRHRQ02643 423 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 TEAD2Q15562 447 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 CNGA3Q16281 694 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 PFKFB4Q16877 469 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 FUT11Q495W5 492 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 MAFFQ9ULX9 164 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 EDDM13A0A1B0GTR0 161 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 MLYCDO95822 493 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 DAOAP59103 153 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 TBX2Q13207 712 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 SOWAHAQ2M3V2 549 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 ADGRF1Q5T601 910 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 MON1BQ7L1V2 547 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 SIAH1Q8IUQ4 282 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 BBS7Q8IWZ6 715 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 ZSCAN18Q8TBC5 510 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 DPEP2Q9H4A9 486 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 PLXNB2O15031 1838 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 IDSP22304 550 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 PSMA4P25789 261 aaKnown RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 SLC1A6P48664 564 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 AUHQ13825 339 aaKnown RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 TEX44Q53QW1 395 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 LINGO4Q6UY18 593 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 KYAT3Q6YP21 454 aaKnown RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 STYXQ8WUJ0 223 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 AP2M1Q96CW1 435 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 IGSF21Q96ID5 467 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 CSPG4P5Q96PW8 444 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 MYCBPQ99417 103 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 PCDH18Q9HCL0 1135 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 GDAP2Q9NXN4 497 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 TMCC3Q9ULS5 477 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 DHX15O43143 795 aaKnown RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 CYP7B1O75881 506 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 ZNF865P0CJ78 1059 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 RPL3P39023 403 aaKnown RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 ESRP1Q6NXG1 681 aaKnown RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 SCAMP5Q8TAC9 235 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 PTCD2Q8WV60 388 aaKnown RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 HMCESQ96FZ2 354 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 CDCA3Q99618 268 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-206ENST00000421141 CDH19Q9H159 772 aa10.8□□□□□ -0.68
PTCH1-206ENST00000421141 CCDC166P0CW27 439 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 RABGGTBP53611 331 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 MLLT1Q03111 559 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 TRIM32Q13049 653 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 HDAC10Q969S8 669 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 DPY30Q9C005 99 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 RHBGQ9H310 441 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 KRT84Q9NSB2 600 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 KCNE2Q9Y6J6 123 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms