RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 LTB4RQ15722 352 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 KCNA10Q16322 511 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 KCTD21Q4G0X4 260 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 ANKRD20A4Q4UJ75 823 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 TEX30Q5JUR7 227 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 STXBP5Q5T5C0 1151 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 EMBQ6PCB8 327 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 MEX3BQ6ZN04 569 aaKnown RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 C4orf50Q6ZRC1 276 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 HTR3DQ70Z44 454 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 MAEAQ7L5Y9 396 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 TAS2R42Q7RTR8 314 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 DCP1BQ8IZD4 617 aaKnown RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 CENPSQ8N2Z9 138 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 FSIP1Q8NA03 581 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 VANGL1Q8TAA9 524 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SNX29Q8TEQ0 813 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 HEXDCQ8WVB3 486 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SMG7Q92540 1137 aaKnown RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 PRCCQ92733 491 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SYN2Q92777 582 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 RFKQ969G6 155 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 ZNF566Q969W8 418 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 PHF21AQ96BD5 680 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 ZNF486Q96H40 463 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 TMEM80Q96HE8 168 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SUSD3Q96L08 255 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 CNOT6LQ96LI5 555 aaKnown RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 FAM227BQ96M60 508 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SERPINB12Q96P63 405 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 PANX2Q96RD6 677 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 MMS19Q96T76 1030 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 RMDN3Q96TC7 470 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SLC26A6Q9BXS9 759 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 FRMD8P1Q9BZ68 369 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 C2orf40Q9H1Z8 148 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 DACT1Q9NYF0 836 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 PLK2Q9NYY3 685 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 RCOR1Q9UKL0 485 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 NOB1Q9ULX3 412 aaKnown RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 PPP2R2CQ9Y2T4 447 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 UTP11Q9Y3A2 253 aaKnown RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 ZNF879B4DU55 563 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 TXNDC9O14530 226 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 EREGO14944 169 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 NPC1O15118 1278 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 TP73O15350 636 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 MAN1A2O60476 641 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SULT1C4O75897 302 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 AKAP3O75969 853 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 KCNH1O95259 989 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 PAPSS2O95340 614 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 PGK2P07205 417 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 GALTP07902 379 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 RARAP10276 462 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 GNSP15586 552 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SELPP16109 830 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 MAOBP27338 520 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 MAPK3P27361 379 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 GRNP28799 593 aaKnown RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 RFC1P35251 1148 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SERPINB5P36952 375 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SLC7A2P52569 658 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 HMGCS2P54868 508 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 NUP107P57740 925 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SPCS3P61009 180 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 RPL10AP62906 217 aaKnown RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 GABPAQ06546 454 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 PMS2P3Q13401 168 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 KYAT1Q16773 422 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 GFOD2Q3B7J2 385 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 ZNF829Q3KNS6 432 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 TNFAIP8L3Q5GJ75 292 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 C1orf185Q5T7R7 199 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 RETSATQ6NUM9 610 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 LMBR1LQ6UX01 489 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 CCNI2Q6ZMN8 369 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 Q6ZVU0 165 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 C16orf86Q6ZW13 317 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 KRT25Q7Z3Z0 450 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SETD3Q86TU7 594 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 ZC3H18Q86VM9 953 aaKnown RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SYCE1Q8N0S2 351 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 ADSSL1Q8N142 457 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 CPA6Q8N4T0 437 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 CNTD1Q8N815 330 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SIMC1Q8NDZ2 872 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 SLC24A4Q8NFF2 622 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 CMASQ8NFW8 434 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 OR9A1PQ8NGU1 263 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 RIN3Q8TB24 985 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 CCDC12Q8WUD4 166 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 USP13Q92995 863 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 CAVIN3Q969G5 261 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 KLHL29Q96CT2 875 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 HEXIM2Q96MH2 286 aaKnown RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 ZNF184Q99676 751 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-202ENST00000420377 TMEM79Q9BSE2 394 aa4.17□□□□□ -1.74
PTPN22-202ENST00000420377 MCMBPQ9BTE3 642 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms