RNA–Protein interactions for RNA: ENST00000419253.1

TTC28-AS1-203, TTC28 antisense RNA 1, humanhuman

TSL 1 (best)

Gene TTC28-AS1, Length 846 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-AS1-203ENST00000419253 SPC24Q8NBT2 197 aa12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 CCNYQ8ND76 341 aa12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 PDCD6IPQ8WUM4 868 aaKnown RBP12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 RAPGEF5Q92565 580 aa12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 CDC6Q99741 560 aa12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 BAG1Q99933 345 aaPredicted RBP12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 WRAP53Q9BUR4 548 aaKnown RBP12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 ERVMER34-1Q9H9K5 563 aa12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 ITM2BQ9Y287 266 aa12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 CA5BQ9Y2D0 317 aa12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 TTLL3Q9Y4R7 772 aa12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 HS3ST3A1Q9Y663 406 aa12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 TP53BP1Q12888 1972 aaPredicted RBP12.54□□□□□ -0.4
TTC28-AS1-203ENST00000419253 ANKRD36A6QL64 1941 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 A0A0A6YYK5 440 aaPredicted RBP12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 SPAARA0A1B0GVQ0 90 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 SOWAHDA6NJG2 315 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 APOL1O14791 398 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 AREL1O15033 823 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 MFSD11O43934 449 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 LZTS3O60299 673 aaPredicted RBP12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 PCDHGA12O60330 932 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 BUB1BO60566 1050 aaPredicted RBP12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 MMP20O60882 483 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 KRT10P13645 584 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 CDC25BP30305 580 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 RGRP47804 291 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 CLDN2P57739 230 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 FAM193AP78312 1265 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 GALNT2Q10471 571 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 HS1BP3Q53T59 392 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 RALGPS1Q5JS13 557 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 PRAMEF14Q5SWL7 426 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 Q6ZSR6 202 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 KIAA1328Q86T90 577 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 VSIG1Q86XK7 387 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 NDUFAF2Q8N183 169 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 TMEM145Q8NBT3 493 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 DENND6BQ8NEG7 585 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 ASB12Q8WXK4 309 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 RNF25Q96BH1 459 aaPredicted RBP12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 FAF2Q96CS3 445 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 CAMK1GQ96NX5 476 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 LENG8Q96PV6 779 aaPredicted RBP12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 RNF157Q96PX1 679 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 NUDCD1Q96RS6 583 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 NT5MQ9NPB1 228 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 PCDH12Q9NPG4 1184 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 ATP8A1Q9Y2Q0 1164 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 HEY1Q9Y5J3 304 aa12.53□□□□□ -0.4
TTC28-AS1-203ENST00000419253 TSPAN11A1L157 253 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 ZNF487B1APH4 448 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 MATN3O15232 486 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 PSTPIP1O43586 416 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 MAP3K6O95382 1288 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 CA4P22748 312 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 CES1P23141 567 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 CCNCP24863 283 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 RABIFP47224 123 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 HADHBP55084 474 aaKnown RBP12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 FOXC1Q12948 553 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 TFDP2Q14188 446 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 TMEM52BQ4KMG9 183 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 BZW1Q7L1Q6 419 aaKnown RBP12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 MGME1Q9BQP7 344 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 C1QTNF2Q9BXJ5 285 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 POLR1EQ9GZS1 481 aaKnown RBP12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 RBM22Q9NW64 420 aaKnown RBP eCLIP12.52□□□□□ -0.416e-7■■■■□ 20.6
TTC28-AS1-203ENST00000419253 GGT7Q9UJ14 662 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 PCOLCE2Q9UKZ9 415 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 APOBEC2Q9Y235 224 aaKnown RBP12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 HYOU1Q9Y4L1 999 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 ALG6Q9Y672 507 aa12.52□□□□□ -0.41
TTC28-AS1-203ENST00000419253 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 PPP1R12AO14974 1030 aaPredicted RBP12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 MUSKO15146 869 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 SOCS5O75159 536 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 TRIM16O95361 564 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 CCNB1P14635 433 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 ITIH2P19823 946 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 RXRGP48443 463 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 THOP1P52888 689 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 MAXP61244 160 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 DYNLT1P63172 113 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 GBE1Q04446 702 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 AP1B1Q10567 949 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 PTK2BQ14289 1009 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 PDK1Q15118 436 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 ARMC12Q5T9G4 340 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 KYAT3Q6YP21 454 aaKnown RBP12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 GCNT7Q6ZNI0 430 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 ABI3BPQ7Z7G0 1075 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 SPATS2Q86XZ4 545 aaKnown RBP12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 CCDC50Q8IVM0 306 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 CCDC13Q8IYE1 715 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 PQLC3Q8N755 202 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 OR13H1Q8NG92 308 aa12.51□□□□□ -0.41
TTC28-AS1-203ENST00000419253 HDAC11Q96DB2 347 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms