RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 DCAF4L2Q8NA75 395 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 BRSK1Q8TDC3 778 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 STYXQ8WUJ0 223 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 INPP5DQ92835 1189 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 ALG14Q96F25 216 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 NSMCE3Q96MG7 304 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 GPR78Q96P69 363 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 SLC22A12Q96S37 553 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 C20orf27Q9GZN8 174 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 LRMDAQ9H2I8 198 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 FAM96AQ9H5X1 160 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 CAB39LQ9H9S4 337 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 SLC40A1Q9NP59 571 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 ZNF358Q9NW07 568 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 LHX3Q9UBR4 397 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 LNPEPQ9UIQ6 1025 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 HAO1Q9UJM8 370 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 SLC39A10Q9ULF5 831 aa9.12□□□□□ -0.95
LINCMD1-201ENST00000418518 PLXNB3Q9ULL4 1909 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 CCDC195A0A1B0GUA6 201 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 SOBPA7XYQ1 873 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 INSIG1O15503 277 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 RPP40O75818 363 aaKnown RBP9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 KLHL2O95198 593 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 PRLP01236 227 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 ADH1AP07327 375 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 T-ENOLP0DO92 83 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 IRF1P10914 325 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 MYL2P10916 166 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 RALBP11234 206 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 NQO1P15559 274 aaKnown RBP9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 STMN1P16949 149 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 GLDCP23378 1020 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 GABRR2P28476 465 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 CDC25CP30307 473 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 SLC26A3P40879 764 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 ABCG1P45844 678 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 SLC1A6P48664 564 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 ARSDP51689 593 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 KPNA2P52292 529 aaKnown RBP9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 ZXDBP98169 803 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 CTBP1Q13363 440 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 KRT72Q14CN4 511 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 TYSND1Q2T9J0 566 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 RNF219Q5W0B1 726 aaPredicted RBP9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 IL31Q6EBC2 164 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 SLC41A1Q8IVJ1 513 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 C10orf107Q8IVU9 208 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 MRPS31Q92665 395 aaKnown RBP9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 IFT43Q96FT9 208 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 TSPAN17Q96FV3 270 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 THOC1Q96FV9 657 aaKnown RBP9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 ATXN7L3BQ96GX2 97 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 TMEM237Q96Q45 408 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 SORT1Q99523 831 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 C19orf43Q9BQ61 176 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 TUBB6Q9BUF5 446 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 TDRD1Q9BXT4 1180 aaKnown RBP9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 WWP1Q9H0M0 922 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 TLE6Q9H808 572 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 NMRAL1Q9HBL8 299 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 NOD2Q9HC29 1040 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 ARHGEF3Q9NR81 526 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 NLE1Q9NVX2 485 aaPredicted RBP9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 OXSMQ9NWU1 459 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 ZFP69BQ9UJL9 534 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 DCTN4Q9UJW0 460 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 TLK1Q9UKI8 766 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 INSL6Q9Y581 213 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 CPQQ9Y646 472 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 NUMBLQ9Y6R0 609 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 PIKFYVEQ9Y2I7 2098 aa9.11□□□□□ -0.95
LINCMD1-201ENST00000418518 A0A0G2JND7 137 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TTC24A2A3L6 582 aaPredicted RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 CCDC78A2IDD5 438 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TYW5A2RUC4 315 aaKnown RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 H0YHG0 523 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 ZNF195O14628 629 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 PHGDHO43175 533 aaKnown RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 ITM2AO43736 263 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 FZD6O60353 706 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TSPAN3O60637 253 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TRIM13O60858 407 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TBL1XO60907 577 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 GJB3O75712 270 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TMCC1O94876 653 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 HAUS5O94927 633 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 S1PR4O95977 384 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 FGBP02675 491 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 LRG1P02750 347 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 C8AP07357 584 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 F7P08709 466 aaPredicted RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 POU2F2P09086 479 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 MYL4P12829 197 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 HDCP19113 662 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 KCNA4P22459 653 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 DDX6P26196 483 aaKnown RBP eCLIP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms