RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 MAPK7Q13164 816 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 PKP1Q13835 747 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 NAA25Q14CX7 972 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 NFIL3Q16649 462 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 MANEAQ5SRI9 462 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 ZNF425Q6IV72 752 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 RETSATQ6NUM9 610 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 TRAPPC11Q7Z392 1133 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 C1QL2Q7Z5L3 287 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 TMTC1Q8IUR5 882 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 MMP21Q8N119 569 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 GHDCQ8N2G8 530 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 LSM14AQ8ND56 463 aaKnown RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 SETD9Q8NE22 299 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 ZNF548Q8NEK5 533 aaPredicted RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 CMASQ8NFW8 434 aaPredicted RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 RFWD2Q8NHY2 731 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 HDAC7Q8WUI4 952 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 SMG7Q92540 1137 aaKnown RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 HVCN1Q96D96 273 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 LRRCC1Q9C099 1032 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 FOXP1Q9H334 677 aaPredicted RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 TASP1Q9H6P5 420 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 PNRC2Q9NPJ4 139 aaKnown RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 SEMA4BQ9NPR2 832 aaPredicted RBP2.83□□□□□ -1.96
VPS41-206ENST00000418457 ZDHHC7Q9NXF8 308 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 GRHL1Q9NZI5 618 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 FBXO40Q9UH90 709 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 ANAPC4Q9UJX5 808 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 HSF4Q9ULV5 492 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 OSGIN2Q9Y236 505 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 SLC4A4Q9Y6R1 1079 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 ELP1O95163 1332 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 MSH6P52701 1360 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 MST1RQ04912 1400 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 DIP2CQ9Y2E4 1556 aa2.83□□□□□ -1.96
VPS41-206ENST00000418457 A0A0A0MQY5 61 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 LY6G6EA0A0G2JKS1 128 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 TMEM272A0A1B0GTI8 110 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 TARSL2A2RTX5 802 aaKnown RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 EYA2O00167 538 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 HIP1O00291 1037 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 CHL1O00533 1208 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 RNMTO43148 476 aaKnown RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 STX6O43752 255 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 ATG13O75143 517 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 TULP3O75386 442 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 EPN2O95208 641 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 SYF2O95926 243 aaKnown RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 AGR2O95994 175 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 IFNA2P01563 188 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 IL1AP01583 271 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 CHRM4P08173 479 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 HNRNPA1P09651 372 aaKnown RBP eCLIP2.82□□□□□ -1.96
VPS41-206ENST00000418457 UNGP13051 313 aaPredicted RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 CD72P21854 359 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 CHMLP26374 656 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 YWHAQP27348 245 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 HSPA4P34932 840 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 NR4A2P43354 598 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 PTPN9P43378 593 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 SLC20A2Q08357 652 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 LAMB3Q13751 1172 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 SLC18A3Q16572 532 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 SYTL3Q4VX76 610 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 NAA35Q5VZE5 725 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 NAPEPLDQ6IQ20 393 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 LVRNQ6Q4G3 990 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 MMS22LQ6ZRQ5 1243 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 ADGRG6Q86SQ4 1221 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 PIM3Q86V86 326 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 CAMK1DQ8IU85 385 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 KRT222Q8N1A0 295 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 ESX1Q8N693 406 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 TSPYL6Q8N831 410 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 NRACQ8N912 160 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 LRRC57Q8N9N7 239 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 CCDC112Q8NEF3 446 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 DNAAF1Q8NEP3 725 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 NOC3LQ8WTT2 800 aaKnown RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 TMEM174Q8WUU8 243 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 RUFY2Q8WXA3 655 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 HSPH1Q92598 858 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 CNOT9Q92600 299 aaKnown RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 HTRA1Q92743 480 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 SLC25A28Q96A46 364 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 MSI2Q96DH6 328 aaKnown RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 HMCESQ96FZ2 354 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 NLRP4Q96MN2 994 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 EIF2AK1Q9BQI3 630 aaKnown RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 FUCA2Q9BTY2 467 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.82□□□□□ -1.96
VPS41-206ENST00000418457 PHF7Q9BWX1 381 aaPredicted RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 TM6SF1Q9BZW5 370 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 LMAN2LQ9H0V9 348 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 FZD3Q9NPG1 666 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 WASH6PQ9NQA3 447 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 ENTPD7Q9NQZ7 604 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 DDX19AQ9NUU7 478 aaKnown RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 POT1Q9NUX5 634 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms