RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 GNSP15586 552 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 MX2P20592 715 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 AP1S1P61966 158 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 PPP2CBP62714 309 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 PPP2CAP67775 309 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 IRX4P78413 519 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 LMNB2Q03252 620 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 ADCY2Q08462 1091 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 PPIDQ08752 370 aaKnown RBP10.63□□□□□ -0.71
RFC1-203ENST00000418436 TFDP2Q14188 446 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 PPP2R5EQ16537 467 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 ODF2Q5BJF6 829 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TRIM61Q5EBN2 209 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TFDP3Q5H9I0 405 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 RALGPS1Q5JS13 557 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 MARC1Q5VT66 337 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TBC1D3GQ6DHY5 549 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TBC1D3CQ6IPX1 549 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TCEAL6Q6IPX3 200 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TIGD7Q6NT04 549 aaPredicted RBP10.63□□□□□ -0.71
RFC1-203ENST00000418436 FBXL19Q6PCT2 694 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 RFX6Q8HWS3 928 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TBC1D3Q8IZP1 549 aaPredicted RBP10.63□□□□□ -0.71
RFC1-203ENST00000418436 SYCE1Q8N0S2 351 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 C12orf50Q8NA57 414 aaPredicted RBP10.63□□□□□ -0.71
RFC1-203ENST00000418436 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.63□□□□□ -0.71
RFC1-203ENST00000418436 NSMCE1Q8WV22 266 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TCEAL3Q969E4 200 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 RAB7BQ96AH8 199 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 RBM41Q96IZ5 413 aaKnown RBP10.63□□□□□ -0.71
RFC1-203ENST00000418436 ZNF641Q96N77 438 aaPredicted RBP10.63□□□□□ -0.71
RFC1-203ENST00000418436 OLFM3Q96PB7 478 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 NUDCD1Q96RS6 583 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 MGME1Q9BQP7 344 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TSGA10Q9BZW7 698 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 SUV39H2Q9H5I1 410 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 RXFP3Q9NSD7 469 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 AMACRQ9UHK6 382 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 FADS3Q9Y5Q0 445 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 SLCO1B1Q9Y6L6 691 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 TRPM6Q9BX84 2022 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 CACNA1EQ15878 2313 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 CFAP54Q96N23 3096 aa10.63□□□□□ -0.71
RFC1-203ENST00000418436 LRRK1Q38SD2 2015 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 LNP1A1A4G5 178 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 PRR5-ARHGAP8B1AHC4 643 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 TRAFD1O14545 582 aaPredicted RBP10.62□□□□□ -0.71
RFC1-203ENST00000418436 AREL1O15033 823 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 BCAT2O15382 392 aaPredicted RBP10.62□□□□□ -0.71
RFC1-203ENST00000418436 SPINT1O43278 529 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 KRT86O43790 486 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 CST8O60676 142 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 RNGTTO60942 597 aaKnown RBP10.62□□□□□ -0.71
RFC1-203ENST00000418436 GJB3O75712 270 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 PIGNO95427 931 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 TIMP2P16035 220 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 TGM2P21980 687 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 VARSP26640 1264 aaKnown RBP10.62□□□□□ -0.71
RFC1-203ENST00000418436 PTPN7P35236 360 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 NUDT1P36639 197 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 ABL2P42684 1182 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 MMP13P45452 471 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 MAPK8P45983 427 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 NR2C2P49116 596 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 SCNN1BP51168 640 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 SUOXP51687 545 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 LIMK1P53667 647 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 RWDD2BP57060 319 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 ARHGAP8P85298 464 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 ZNF235Q14590 738 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 PDK1Q15118 436 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 TMEM259Q4ZIN3 620 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 ALG1LQ6GMV1 187 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 NPNTQ6UXI9 565 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 PEX26Q7Z412 305 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 CAMK1DQ8IU85 385 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 CCDC13Q8IYE1 715 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 BBS5Q8N3I7 341 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 ZCCHC9Q8N567 271 aaKnown RBP10.62□□□□□ -0.71
RFC1-203ENST00000418436 UBE2Q2Q8WVN8 375 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 ALG3Q92685 438 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 ECHDC3Q96DC8 303 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 PDLIM2Q96JY6 352 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 ZNF830Q96NB3 372 aaPredicted RBP10.62□□□□□ -0.71
RFC1-203ENST00000418436 NUSAP1Q9BXS6 441 aaKnown RBP10.62□□□□□ -0.71
RFC1-203ENST00000418436 BRD8Q9H0E9 1235 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 MIR1-1HGQ9H1L0 117 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 ATP13A3Q9H7F0 1226 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 TM9SF3Q9HD45 589 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 AMFRQ9UKV5 643 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 EFR3BQ9Y2G0 817 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 HEY1Q9Y5J3 304 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 CAPN6Q9Y6Q1 641 aa10.62□□□□□ -0.71
RFC1-203ENST00000418436 DMXL1Q9Y485 3027 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.61□□□□□ -0.71
RFC1-203ENST00000418436 A0A1W2PQU0 124 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 MIF4GDA9UHW6 222 aaKnown RBP10.61□□□□□ -0.71
RFC1-203ENST00000418436 TSPAN6O43657 245 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 CFIP05156 583 aa10.61□□□□□ -0.71
RFC1-203ENST00000418436 CCDC175P0C221 793 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms