RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 CDH23Q9H251 3354 aa13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 UBXN8O00124 270 aa13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 GRID2O43424 1007 aa13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 B4GAT1O43505 415 aa13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 PAGE1O75459 146 aa13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 NFKBIAP25963 317 aa13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 MTTPP55157 894 aa13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 PIGFQ07326 219 aa13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 PTGR2Q8N8N7 351 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 C3orf58Q8NDZ4 430 aa13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 OR6K2Q8NGY2 324 aa13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 PNPLA8Q9NP80 782 aa13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 IPO11Q9UI26 975 aaKnown RBP13.3□□□□□ -0.28
TNFRSF8-203ENST00000417814 PTGES3LE9PB15 166 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 ZNF189O75820 626 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 CD4P01730 458 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 RBBP7Q16576 425 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 CYP51A1Q16850 503 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 RABL3Q5HYI8 236 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 XKR5Q6UX68 686 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 TAS2R42Q7RTR8 314 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 THAP11Q96EK4 314 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 RPRD1AQ96P16 312 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 HACD3Q9P035 362 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 STK39Q9UEW8 545 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 CIDEBQ9UHD4 219 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 MATN2O00339 956 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 SRP72O76094 671 aaKnown RBP13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 CNTFP26441 200 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 PTPN9P43378 593 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 YBX1P67809 324 aaKnown RBP13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 PSMD5Q16401 504 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 MARCH8Q5T0T0 291 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 ANKRD23Q86SG2 305 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 ZNF598Q86UK7 904 aaKnown RBP13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 ARHGAP18Q8N392 663 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 METTL25Q8N6Q8 603 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 IFT43Q96FT9 208 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 FBXL20Q96IG2 436 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 C12orf42Q96LP6 360 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 RTKNQ9BST9 563 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 AP5M1Q9H0R1 490 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 BLOC1S6Q9UL45 172 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 SHROOM3Q8TF72 1996 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 HEATR9A2RTY3 570 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 PRORSD1PA6NEY8 169 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 GNGT2O14610 69 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 NRP2O60462 931 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 THP07101 528 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 THPOP40225 353 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 MAGEA8P43361 318 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 SLC10A7Q0GE19 358 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 RAP1GAP2Q684P5 730 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 CENPLQ8N0S6 344 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 ATAD1Q8NBU5 361 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 OR13C4Q8NGS5 318 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 DQX1Q8TE96 717 aaKnown RBP13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 RNF145Q96MT1 663 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 SEPT5Q99719 369 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 OLFM1Q99784 485 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 ZNF112Q9UJU3 913 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 PPME1Q9Y570 386 aa13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 MAGED1Q9Y5V3 778 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF8-203ENST00000417814 H3BNX3 289 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 CNTN5O94779 1100 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 SNAI1O95863 264 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 HLA-DQB2P05538 268 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 ITGB1P05556 798 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 MMP3P08254 477 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 DARSP14868 501 aaKnown RBP13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 MAGP20916 626 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 HADHAP40939 763 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 RPL5P46777 297 aaKnown RBP13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 OR1G1P47890 313 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 KCNC1P48547 511 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 ARSDP51689 593 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 MYBPC1Q00872 1141 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 TBCCQ15814 346 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 TAPT1Q6NXT6 567 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 TLK2Q86UE8 772 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 MFSD6LQ8IWD5 586 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 CLHC1Q8NHS4 586 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 TMEM174Q8WUU8 243 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 ALG2Q9H553 416 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 RGS18Q9NS28 235 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 ARL5AQ9Y689 179 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 ARHGAP10A1A4S6 786 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 TFAP2AP05549 437 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 HGFP14210 728 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 EDNRBP24530 442 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 FOXA1P55317 472 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 LAPTM4AQ15012 233 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 TIGD2Q4W5G0 525 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 TIGD5Q53EQ6 642 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 DHFR2Q86XF0 187 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 RBM12BQ8IXT5 1001 aaKnown RBP13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 PSD4Q8NDX1 1056 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 APOL5Q9BWW9 433 aa13.28□□□□□ -0.28
TNFRSF8-203ENST00000417814 DGCR6LQ9BY27 220 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms