RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 CES4AQ5XG92 561 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 PDPK2PQ6A1A2 396 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 ZCCHC23Q6ZST2 131 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 DENND5BQ6ZUT9 1274 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 SLC26A9Q7LBE3 791 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 SDCCAG8Q86SQ7 713 aaPredicted RBP6.9□□□□□ -1.3
VNN3-205ENST00000417437 RASSF3Q86WH2 238 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 NPAS3Q8IXF0 933 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 YAF2Q8IY57 180 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 ST13P4Q8IZP2 240 aaPredicted RBP6.9□□□□□ -1.3
VNN3-205ENST00000417437 ELMOD1Q8N336 334 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 GALNT15Q8N3T1 639 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 CCDC33Q8N5R6 958 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 C12orf29Q8N999 325 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 SMG8Q8ND04 991 aaKnown RBP6.9□□□□□ -1.3
VNN3-205ENST00000417437 BEST2Q8NFU1 509 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 OR6B3Q8NGW1 331 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 FBXO27Q8NI29 283 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 CSGALNACT1Q8TDX6 532 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 ACTRT2Q8TDY3 377 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 NELL1Q92832 810 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 DNASE1L2Q92874 299 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 IRF7Q92985 503 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 CLPTM1LQ96KA5 538 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 OLFM3Q96PB7 478 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 CSPG4P5Q96PW8 444 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 HS3ST6Q96QI5 342 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 KCNK16Q96T55 309 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 EBF4Q9BQW3 602 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 MRPL45Q9BRJ2 306 aaKnown RBP6.9□□□□□ -1.3
VNN3-205ENST00000417437 EIF2AQ9BY44 585 aaKnown RBP6.9□□□□□ -1.3
VNN3-205ENST00000417437 KLHL4Q9C0H6 718 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 C20orf27Q9GZN8 174 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 CHRDQ9H2X0 955 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 ZFP14Q9HCL3 533 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 PNPOQ9NVS9 261 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 HCFC1R1Q9NWW0 138 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 MIOSQ9NXC5 875 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.9□□□□□ -1.3
VNN3-205ENST00000417437 GDE1Q9NZC3 331 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 CPSF2Q9P2I0 782 aaKnown RBP6.9□□□□□ -1.3
VNN3-205ENST00000417437 MID2Q9UJV3 735 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 EMCNQ9ULC0 261 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 FZD10Q9ULW2 581 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 ARHGAP26Q9UNA1 814 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 F5P12259 2224 aa6.9□□□□□ -1.3
VNN3-205ENST00000417437 GREB1Q4ZG55 1949 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 MAGEB16A2A368 324 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 CASTOR2A6NHX0 329 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 KPNA7A9QM74 516 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 RNF103O00237 685 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 ZNF197O14709 1029 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 BUD23O43709 281 aaKnown RBP6.89□□□□□ -1.31
VNN3-205ENST00000417437 PEX1O43933 1283 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 SIN3BO75182 1162 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 LYPLA1O75608 230 aaPredicted RBP6.89□□□□□ -1.31
VNN3-205ENST00000417437 MAP3K6O95382 1288 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 HSPA4LO95757 839 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 GSRP00390 522 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 ALDOAP04075 364 aaKnown RBP6.89□□□□□ -1.31
VNN3-205ENST00000417437 APOA4P06727 396 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 PROS1P07225 676 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 ITGA2BP08514 1039 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 COX4I1P13073 169 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 CCDC130P13994 396 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 UQCRBP14927 111 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 ALOX15P16050 662 aaPredicted RBP6.89□□□□□ -1.31
VNN3-205ENST00000417437 PTPN2P17706 415 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 MGAT1P26572 445 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 GDI1P31150 447 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 HOXA9P31269 272 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 HOXA11P31270 313 aaPredicted RBP6.89□□□□□ -1.31
VNN3-205ENST00000417437 HADHAP40939 763 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 GRIA1P42261 906 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 SERPINB8P50452 374 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 KPNA1P52294 538 aaPredicted RBP6.89□□□□□ -1.31
VNN3-205ENST00000417437 HK2P52789 917 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 PRKAA2P54646 552 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 BCAT1P54687 386 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 SESN2P58004 480 aaPredicted RBP6.89□□□□□ -1.31
VNN3-205ENST00000417437 SLC25A3Q00325 362 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 GBE1Q04446 702 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 DSC1Q08554 894 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 MED21Q13503 144 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 TUBB3Q13509 450 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 CUL3Q13618 768 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 FRG1Q14331 258 aaKnown RBP6.89□□□□□ -1.31
VNN3-205ENST00000417437 LRRC32Q14392 662 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 PCBP1Q15365 356 aaKnown RBP eCLIP6.89□□□□□ -1.31
VNN3-205ENST00000417437 RTP2Q5QGT7 225 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 RABGAP1LQ5R372 815 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 METTL21CQ5VZV1 264 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 NCBP2-AS2Q69YL0 99 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 TANGO2Q6ICL3 276 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 PGM2L1Q6PCE3 622 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 C16orf89Q6UX73 402 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 ACAD11Q709F0 780 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 STRADAQ7RTN6 431 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 DHDDSQ86SQ9 333 aa6.89□□□□□ -1.31
VNN3-205ENST00000417437 TTC30AQ86WT1 665 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms