RNA–Protein interactions for RNA: ENST00000417295.6

SH3GL1-202, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

TSL 2 BASIC

Gene SH3GL1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-202ENST00000417295 ECHDC3Q96DC8 303 aa28.87■■■□□ 2.21
SH3GL1-202ENST00000417295 ZNF830Q96NB3 372 aaPredicted RBP28.87■■■□□ 2.21
SH3GL1-202ENST00000417295 SCUBE2Q9NQ36 999 aa28.87■■■□□ 2.21
SH3GL1-202ENST00000417295 RBM22Q9NW64 420 aaKnown RBP eCLIP28.87■■■□□ 2.212e-6■■□□□ 13.7
SH3GL1-202ENST00000417295 SAE1Q9UBE0 346 aaPredicted RBP28.87■■■□□ 2.21
SH3GL1-202ENST00000417295 PCDHGC4Q9Y5F7 938 aa28.87■■■□□ 2.21
SH3GL1-202ENST00000417295 IGLON5A6NGN9 336 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 CST8O60676 142 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 PRKCGP05129 697 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 CCNB1P14635 433 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 NT5DC3Q86UY8 548 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 CCDC13Q8IYE1 715 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 OLFM3Q96PB7 478 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 PCDH12Q9NPG4 1184 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 DNAAF2Q9NVR5 837 aaKnown RBP28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 hCG_1818297A0A087WSY0 165 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 UPK3BL1B0FP48 263 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 UPK3BL2E5RIL1 263 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 PRAMEF26H0Y7S4 382 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 KCNK1O00180 336 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 KCNK3O14649 394 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 PAK4O96013 591 aaPredicted RBP28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 XPAP23025 273 aaPredicted RBP28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 PPIDQ08752 370 aaKnown RBP28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 HLA-BQ31612 363 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 FAM182AQ5T1J6 154 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 B4GALNT4Q76KP1 1039 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 CCDC50Q8IVM0 306 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 TMEM145Q8NBT3 493 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 RBM41Q96IZ5 413 aaKnown RBP28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 SLC17A9Q9BYT1 436 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 GAREM1Q9H706 876 aa28.86■■■□□ 2.21
SH3GL1-202ENST00000417295 HNRNPA2B1P22626 353 aaKnown RBP28.85■■■□□ 2.21
SH3GL1-202ENST00000417295 CTNNA2P26232 953 aa28.85■■■□□ 2.21
SH3GL1-202ENST00000417295 CTSKP43235 329 aa28.85■■■□□ 2.21
SH3GL1-202ENST00000417295 PEX5P50542 639 aa28.85■■■□□ 2.21
SH3GL1-202ENST00000417295 C21orf59P57076 290 aa28.85■■■□□ 2.21
SH3GL1-202ENST00000417295 TFDP2Q14188 446 aa28.85■■■□□ 2.21
SH3GL1-202ENST00000417295 IL27RAQ6UWB1 636 aa28.85■■■□□ 2.21
SH3GL1-202ENST00000417295 ALG3Q92685 438 aa28.85■■■□□ 2.21
SH3GL1-202ENST00000417295 WRAP53Q9BUR4 548 aaKnown RBP28.85■■■□□ 2.21
SH3GL1-202ENST00000417295 C1QTNF2Q9BXJ5 285 aa28.85■■■□□ 2.21
SH3GL1-202ENST00000417295 FNDC3AQ9Y2H6 1198 aaKnown RBP28.85■■■□□ 2.21
SH3GL1-202ENST00000417295 CAPN6Q9Y6Q1 641 aa28.85■■■□□ 2.21
SH3GL1-202ENST00000417295 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 CCDC66A2RUB6 948 aa28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 MMP20O60882 483 aa28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 OPHN1O60890 802 aa28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 PECAM1P16284 738 aaPredicted RBP28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 CCZ1BP86790 482 aa28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 CCZ1P86791 482 aaPredicted RBP28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 SEMG2Q02383 582 aa28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 ITKQ08881 620 aa28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 STAT4Q14765 748 aa28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 PDK1Q15118 436 aa28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 MFSD2AQ8NA29 543 aa28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 SEMA3CQ99985 751 aa28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 POLR1EQ9GZS1 481 aaKnown RBP28.84■■■□□ 2.21
SH3GL1-202ENST00000417295 PLXNA2O75051 1894 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 H0Y8X5 98 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 RAD51BO15315 384 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 HTRA2O43464 458 aaPredicted RBP28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 JCHAINP01591 159 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 HLA-DQB2P05538 268 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 AKT2P31751 481 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 SUOXP51687 545 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 CLDN2P57739 230 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 AP1B1Q10567 949 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 TRAF2Q12933 501 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 ZBTB17Q13105 803 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 HEMGNQ9BXL5 484 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 PACSIN2Q9UNF0 486 aaPredicted RBP28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 ATP8A1Q9Y2Q0 1164 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 TTLL3Q9Y4R7 772 aa28.83■■■□□ 2.21
SH3GL1-202ENST00000417295 ADAMTS9Q9P2N4 1935 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 TLR4O00206 839 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 RIOK3O14730 519 aaKnown RBP28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 SOCS5O75159 536 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 CER1O95813 267 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 FTCDO95954 541 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 NR2C2P49116 596 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 DSC2Q02487 901 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 ELP6Q0PNE2 266 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 IHHQ14623 411 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 PPP2R5EQ16537 467 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 TMEM52BQ4KMG9 183 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 SLC45A4Q5BKX6 768 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 RALGPS1Q5JS13 557 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 ALG1LQ6GMV1 187 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 PEX26Q7Z412 305 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 PAF1Q8N7H5 531 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 CXorf40AQ8TE69 158 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 PDCD6IPQ8WUM4 868 aaKnown RBP28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 SKA1Q96BD8 255 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 HERPUD2Q9BSE4 406 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 AMFRQ9UKV5 643 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 CACNA1EQ15878 2313 aa28.82■■■□□ 2.2
SH3GL1-202ENST00000417295 PPP1R12AO14974 1030 aaPredicted RBP28.81■■■□□ 2.2
SH3GL1-202ENST00000417295 TGM2P21980 687 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms