RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 SLC12A1Q13621 1099 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 EMC10Q5UCC4 262 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 CYS1Q717R9 158 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 MARK2Q7KZI7 788 aaKnown RBP17.11■□□□□ 0.33
CALD1-204ENST00000417172 TAOK1Q7L7X3 1001 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 SRLQ86TD4 932 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 MICALL1Q8N3F8 863 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 PNPLA1Q8N8W4 532 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 RMDN1Q96DB5 314 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 KCNK9Q9NPC2 374 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 IARS2Q9NSE4 1012 aaKnown RBP17.11■□□□□ 0.33
CALD1-204ENST00000417172 TREX1Q9NSU2 369 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 PRKAG3Q9UGI9 489 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 MTCH2Q9Y6C9 303 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 TRIM49D1C9J1S8 452 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 AURKAO14965 403 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 FGF1P05230 155 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 CHN1P15882 459 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 HLA-DPA1P20036 260 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 SLC6A11P48066 632 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 NSUN2Q08J23 767 aaKnown RBP eCLIP17.11■□□□□ 0.33
CALD1-204ENST00000417172 GAB4Q2WGN9 574 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 ATAT1Q5SQI0 421 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 TEDDM1Q5T9Z0 273 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 MROH9Q5TGP6 573 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 PACS1Q6VY07 963 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 CAMK1DQ8IU85 385 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 SFTPA1Q8IWL2 248 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 MGARPQ8TDB4 240 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 ATXN7L3BQ96GX2 97 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 FAM161BQ96MY7 647 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 POMKQ9H5K3 350 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 HPS4Q9NQG7 708 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 GGT7Q9UJ14 662 aa17.11■□□□□ 0.33
CALD1-204ENST00000417172 LDB2O43679 373 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 EPOP01588 193 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 SLC4A1P02730 911 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 KRT4P19013 534 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 GBP2P32456 591 aaPredicted RBP17.1■□□□□ 0.33
CALD1-204ENST00000417172 TMPRSS15P98073 1019 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 CTC1Q2NKJ3 1217 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 ACCSLQ4AC99 568 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 MBLAC2Q68D91 279 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 C22orf39Q6P5X5 142 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 ANKRD42Q8N9B4 389 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 OR13J1Q8NGT2 312 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 CDKL2Q92772 493 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 VOPP1Q96AW1 172 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 FAM83CQ9BQN1 747 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 RPP25Q9BUL9 199 aaKnown RBP17.1■□□□□ 0.33
CALD1-204ENST00000417172 TRPV4Q9HBA0 871 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 ZFP14Q9HCL3 533 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 ZNF180Q9UJW8 692 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 HS3ST2Q9Y278 367 aa17.1■□□□□ 0.33
CALD1-204ENST00000417172 IQANK1A0A1B0GTG1 560 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 HEATR9A2RTY3 570 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 ADH1CP00326 375 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 CISD3P0C7P0 127 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 HOXB8P17481 243 aaPredicted RBP17.09■□□□□ 0.33
CALD1-204ENST00000417172 ARCN1P48444 511 aaKnown RBP17.09■□□□□ 0.33
CALD1-204ENST00000417172 ARSDP51689 593 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 ECT2LQ008S8 904 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 LRRC14Q15048 493 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 SLC14A2Q15849 920 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 TSTD2Q5T7W7 516 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 CES5AQ6NT32 575 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 PARM1Q6UWI2 310 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 RYBPQ8N488 228 aaPredicted RBP17.09■□□□□ 0.33
CALD1-204ENST00000417172 FGF14Q92915 247 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 CAPS2Q9BXY5 557 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 C12orf65Q9H3J6 166 aaKnown RBP17.09■□□□□ 0.33
CALD1-204ENST00000417172 MRM3Q9HC36 420 aaKnown RBP17.09■□□□□ 0.33
CALD1-204ENST00000417172 PCDHB9Q9Y5E1 797 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 MROH6A6NGR9 719 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 OR51F1A6NGY5 319 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 HOXC11O43248 304 aaPredicted RBP17.09■□□□□ 0.33
CALD1-204ENST00000417172 TULP3O75386 442 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 IGFBP4P22692 258 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 MDH1P40925 334 aaKnown RBP17.09■□□□□ 0.33
CALD1-204ENST00000417172 DGKGP49619 791 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 GNGT1P63211 74 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 TERF2Q15554 542 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 Q6ZVU0 165 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 STRA8Q7Z7C7 330 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 KIAA0907Q7Z7F0 614 aaPredicted RBP17.09■□□□□ 0.33
CALD1-204ENST00000417172 DENND6AQ8IWF6 608 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 ARFGAP2Q8N6H7 521 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 MDGA1Q8NFP4 955 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 OR13C4Q8NGS5 318 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 PTCD2Q8WV60 388 aaKnown RBP17.09■□□□□ 0.33
CALD1-204ENST00000417172 RANBP9Q96S59 729 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 CIPCQ9C0C6 399 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 MTG2Q9H4K7 406 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 GTSE1Q9NYZ3 720 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.09■□□□□ 0.33
CALD1-204ENST00000417172 SLC25A13Q9UJS0 675 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 FBXO10Q9UK96 956 aa17.09■□□□□ 0.33
CALD1-204ENST00000417172 TCF20Q9UGU0 1960 aaKnown RBP17.08■□□□□ 0.33
CALD1-204ENST00000417172 ANTXRLA6NF34 631 aa17.08■□□□□ 0.33
CALD1-204ENST00000417172 KDSRQ06136 332 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms