RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 CYP1B1Q16678 543 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 DUOXA1Q1HG43 343 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 INO80DQ53TQ3 878 aaPredicted RBP13.79□□□□□ -0.2
CPNE1-209ENST00000415920 SDE2Q6IQ49 451 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 TTC27Q6P3X3 843 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 PCDH20Q8N6Y1 951 aaKnown RBP13.79□□□□□ -0.2
CPNE1-209ENST00000415920 CCDC89Q8N998 374 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 FATE1Q969F0 183 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 HSPA12BQ96MM6 686 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 AGAP3Q96P47 875 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 TUBB2BQ9BVA1 445 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 CEP44Q9C0F1 390 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 TMEM245Q9H330 911 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 SLC32A1Q9H598 525 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 RBM22Q9NW64 420 aaKnown RBP eCLIP13.79□□□□□ -0.21e-18■■□□□ 14.2
CPNE1-209ENST00000415920 LRRK1Q38SD2 2015 aa13.79□□□□□ -0.2
CPNE1-209ENST00000415920 SCN8AQ9UQD0 1980 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 CXorf51AA0A1B0GTR3 108 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 TMEM8BA6NDV4 472 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 UPK3BL1B0FP48 263 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 UPK3BL2E5RIL1 263 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 NPC1O15118 1278 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 MUSKO15146 869 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 ATP9BO43861 1147 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 CHRNA3P32297 505 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 COILP38432 576 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-209ENST00000415920 RGRP47804 291 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 WASHC5Q12768 1159 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 HNRNPDQ14103 355 aaKnown RBP13.78□□□□□ -0.2
CPNE1-209ENST00000415920 CYTH1Q15438 398 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 KCTD19Q17RG1 926 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-209ENST00000415920 DRICH1Q6PGQ1 229 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-209ENST00000415920 ARHGEF18Q6ZSZ5 1173 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 ZNF567Q8N184 647 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 PGBD5Q8N414 524 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 KDM1BQ8NB78 822 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 SPATA4Q8NEY3 305 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 OR2AP1Q8NGE2 309 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 CCDC110Q8TBZ0 833 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 GRIN3AQ8TCU5 1115 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 KCNV2Q8TDN2 545 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 GRK7Q8WTQ7 553 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 FRS2Q8WU20 508 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 MRGPRX1Q96LB2 322 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 PSKH2Q96QS6 385 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 IL12RB2Q99665 862 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 GABRG3Q99928 467 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 MGME1Q9BQP7 344 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 POLR1EQ9GZS1 481 aaKnown RBP13.78□□□□□ -0.2
CPNE1-209ENST00000415920 ZDHHC6Q9H6R6 413 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 RSPH14Q9UHP6 348 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 MSRB2Q9Y3D2 182 aa13.78□□□□□ -0.2
CPNE1-209ENST00000415920 ARHGAP33O14559 1287 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 SYNCRIPO60506 623 aaKnown RBP13.77□□□□□ -0.21
CPNE1-209ENST00000415920 OPHN1O60890 802 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 SIN3BO75182 1162 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 GJB3O75712 270 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 ECEL1O95672 775 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 GAS8O95995 478 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 GSRP00390 522 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 CAPNS1P04632 268 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 NFKB1P19838 968 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 HOXD12P35452 270 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 ACTN2P35609 894 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 HSPA9P38646 679 aaKnown RBP13.77□□□□□ -0.21
CPNE1-209ENST00000415920 VPS41P49754 854 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-209ENST00000415920 CCNHP51946 323 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-209ENST00000415920 ATXN3P54252 364 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-209ENST00000415920 SNRPD1P62314 119 aaKnown RBP13.77□□□□□ -0.21
CPNE1-209ENST00000415920 DSC2Q02487 901 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 HNRNPA1L2Q32P51 320 aaKnown RBP13.77□□□□□ -0.21
CPNE1-209ENST00000415920 ITPRIPL1Q6GPH6 555 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 PRUNE1Q86TP1 453 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 HDDC3Q8N4P3 179 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 TAB3Q8N5C8 712 aaPredicted RBP13.77□□□□□ -0.21
CPNE1-209ENST00000415920 TEX26Q8N6G2 289 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 MNS1Q8NEH6 495 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 SPATA13Q96N96 652 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 KRT12Q99456 494 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 VAT1Q99536 393 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 SCUBE2Q9NQ36 999 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 PLXNB3Q9ULL4 1909 aa13.77□□□□□ -0.21
CPNE1-209ENST00000415920 DMXL2Q8TDJ6 3036 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 TTC24A2A3L6 582 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-209ENST00000415920 CTAGE15A4D2H0 777 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 ZBTB24O43167 697 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-209ENST00000415920 SH3BP5O60239 455 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 CTAGE8P0CG41 777 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 PSMB4P28070 264 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 PSMD8P48556 350 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 SCNN1BP51168 640 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 DR1Q01658 176 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 ENPP2Q13822 863 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 PPP1R7Q15435 360 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 TRIP13Q15645 432 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-209ENST00000415920 TEX44Q53QW1 395 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 CARD16Q5EG05 197 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 ANKRD20A2Q5SQ80 823 aa13.76□□□□□ -0.21
CPNE1-209ENST00000415920 FAXCQ5TGI0 409 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms