RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 GDNFP39905 211 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 CDR1P51861 262 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 DGKEP52429 567 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ERVFRD-1P60508 538 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 GOLGA8FQ08AF8 430 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 EPS8Q12929 822 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ITGA7Q13683 1181 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 HSP90AB3PQ58FF7 597 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 FOXR2Q6PJQ5 311 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 USP30Q70CQ3 517 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 RRM2BQ7LG56 351 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 WDR5BQ86VZ2 330 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 SYT12Q8IV01 421 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 TTC5Q8N0Z6 440 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 TMEM116Q8NCL8 245 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ATG4AQ8WYN0 398 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 GLG1Q92896 1179 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ZNF830Q96NB3 372 aaPredicted RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 B3GNT4Q9C0J1 378 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 KIF9Q9HAQ2 790 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ARHGEF3Q9NR81 526 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 PI4KBQ9UBF8 816 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ST3GAL5Q9UNP4 418 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 DRG1Q9Y295 367 aaKnown RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 FANCMQ8IYD8 2048 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 PAPSS1O43252 624 aaPredicted RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 SPRY1O43609 319 aaPredicted RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 ATP2C2O75185 946 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 SCAF4O95104 1147 aaKnown RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 ATXN1LP0C7T5 689 aaKnown RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 VSIG10L2P0DP72 767 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 CETPP11597 493 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 CYP2C9P11712 490 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ZFXP17010 805 aaPredicted RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 TNNT2P45379 298 aaPredicted RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 NRIP1P48552 1158 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 WNT3AP56704 352 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 EIF4A1P60842 406 aaKnown RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 NHLH1Q02575 133 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 NHLH2Q02577 135 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 SP140Q13342 867 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 CAMK1Q14012 370 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 MEP1BQ16820 701 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 LEXMQ3ZCV2 418 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 C19orf54Q5BKX5 351 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 CERCAMQ5T4B2 595 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 GARNL3Q5VVW2 1013 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 TMEM198Q66K66 360 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 TRIM72Q6ZMU5 477 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 PRR23BQ6ZRT6 265 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 RAPH1Q70E73 1250 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 FRMD5Q7Z6J6 570 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 SDCCAG8Q86SQ7 713 aaPredicted RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 GPAT4Q86UL3 456 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 FAM83AQ86UY5 434 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 SPC24Q8NBT2 197 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ZFP28Q8NHY6 868 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ST7LQ8TDW4 575 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 C2CD4CQ8TF44 421 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 TEKT4Q8WW24 435 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 RNF31Q96EP0 1072 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 PPP1R13BQ96KQ4 1090 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 GLOD4Q9HC38 313 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 TRPM5Q9NZQ8 1165 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 APPL1Q9UKG1 709 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 CNOT11Q9UKZ1 510 aaKnown RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 RIMKLBQ9ULI2 386 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 CTNND2Q9UQB3 1225 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 NEU2Q9Y3R4 380 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 SIPA1L1O43166 1804 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 LACTBL1A8MY62 500 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 CD3EAPO15446 510 aaKnown RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 RAD17O75943 681 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 SLCO2B1O94956 709 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ZFPL1O95159 310 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 GLP2RO95838 553 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 DDAH2O95865 285 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 RB1P06400 928 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 FDXRP22570 491 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 RPL15P61313 204 aaKnown RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 EFNB1P98172 346 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 PPP2R2BQ00005 443 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 PIGFQ07326 219 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 TMEM62Q0P6H9 643 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 CCNIQ14094 377 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 RCN2Q14257 317 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 KCNB1Q14721 858 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 GEN1Q17RS7 908 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 SUPT20HL1Q3ZLR7 823 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 TREML2Q5T2D2 321 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 NAA16Q6N069 864 aaPredicted RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 RPAINQ86UA6 219 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ALYREFQ86V81 257 aaKnown RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 TBC1D21Q8IYX1 336 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 RFWD2Q8NHY2 731 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 FEZF2Q8TBJ5 459 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 PIGOQ8TEQ8 1089 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ZNF75CPQ92670 426 aaPredicted RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 INTS12Q96CB8 462 aaKnown RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 KTI12Q96EK9 354 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms