RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 EIF2B5Q13144 721 aaKnown RBP11.71□□□□□ -0.53
LINC00963-201ENST00000412141 CAMK2BQ13554 666 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 DEFB133Q30KQ1 61 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 ZSCAN23Q3MJ62 389 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 FIGNQ5HY92 759 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 PARGQ86W56 976 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 ZSWIM9Q86XI8 627 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 CPNE8Q86YQ8 564 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 DCP2Q8IU60 420 aaKnown RBP11.71□□□□□ -0.53
LINC00963-201ENST00000412141 RBFAQ8N0V3 343 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 PDCD7Q8N8D1 485 aaKnown RBP11.71□□□□□ -0.53
LINC00963-201ENST00000412141 ZNF548Q8NEK5 533 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-201ENST00000412141 OR4C6Q8NH72 309 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 FNIP1Q8TF40 1166 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 HNRNPLLQ8WVV9 542 aaKnown RBP11.71□□□□□ -0.53
LINC00963-201ENST00000412141 CENPTQ96BT3 561 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 LENG8Q96PV6 779 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-201ENST00000412141 NUP85Q9BW27 656 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 CPEB1Q9BZB8 566 aaKnown RBP11.71□□□□□ -0.53
LINC00963-201ENST00000412141 DKK3Q9UBP4 350 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 ANAPC7Q9UJX3 599 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 CAPN11Q9UMQ6 739 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 A0A1W2PQJ5 194 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 CPED1A4D0V7 1026 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 NEMP2A6NFY4 417 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 EIF3CLB5ME19 914 aaKnown RBP11.7□□□□□ -0.54
LINC00963-201ENST00000412141 H3BM21 787 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 K7ESM1 405 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 MUSKO15146 869 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 LZTS3O60299 673 aaPredicted RBP11.7□□□□□ -0.54
LINC00963-201ENST00000412141 CSF2P04141 144 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 GYPCP04921 128 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 GIMD1P0DJR0 217 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 RARAP10276 462 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 ALPPL2P10696 532 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 NME1P15531 152 aaKnown RBP11.7□□□□□ -0.54
LINC00963-201ENST00000412141 CASP14P31944 242 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 PCK1P35558 622 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 EIF4A3P38919 411 aaKnown RBP11.7□□□□□ -0.54
LINC00963-201ENST00000412141 ARL4AP40617 200 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 LIG3P49916 1009 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 PFN3P60673 137 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 BCL2L1Q07817 233 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 MMRN1Q13201 1228 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 DPYSQ14117 519 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 IRF4Q15306 451 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 CDKN3Q16667 212 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 UGP2Q16851 508 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 FAXCQ5TGI0 409 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 ERAP2Q6P179 960 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 ALKBH5Q6P6C2 394 aaKnown RBP11.7□□□□□ -0.54
LINC00963-201ENST00000412141 NYAP1Q6ZVC0 841 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 RD3Q7Z3Z2 195 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC00963-201ENST00000412141 PDCD6IPQ8WUM4 868 aaKnown RBP11.7□□□□□ -0.54
LINC00963-201ENST00000412141 APOLD1Q96LR9 279 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 NSMCE3Q96MG7 304 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 DCBLD2Q96PD2 775 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 EIF3CQ99613 913 aaKnown RBP11.7□□□□□ -0.54
LINC00963-201ENST00000412141 C1QTNF7Q9BXJ2 289 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 XPO4Q9C0E2 1151 aaKnown RBP11.7□□□□□ -0.54
LINC00963-201ENST00000412141 ATP13A3Q9H7F0 1226 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 PNMA8BQ9ULN7 279 aaPredicted RBP11.7□□□□□ -0.54
LINC00963-201ENST00000412141 LHX6Q9UPM6 363 aa11.7□□□□□ -0.54
LINC00963-201ENST00000412141 BZW2Q9Y6E2 419 aaKnown RBP11.7□□□□□ -0.54
LINC00963-201ENST00000412141 TMEM110-MUSTN1A8MSY1 372 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
LINC00963-201ENST00000412141 AQP9O43315 295 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 GCATO75600 419 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 PCCBP05166 539 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 C6P13671 934 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 ACP1P24666 158 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 SERPINA4P29622 427 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 ADKP55263 362 aaKnown RBP11.69□□□□□ -0.54
LINC00963-201ENST00000412141 CDH6P55285 790 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 INSM1Q01101 510 aaPredicted RBP11.69□□□□□ -0.54
LINC00963-201ENST00000412141 IL10RBQ08334 325 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 SLC10A7Q0GE19 358 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 ELP6Q0PNE2 266 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 PIGHQ14442 188 aaPredicted RBP11.69□□□□□ -0.54
LINC00963-201ENST00000412141 KRT81Q14533 505 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 ZNF235Q14590 738 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 INPP5AQ14642 412 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 LBRQ14739 615 aaKnown RBP11.69□□□□□ -0.54
LINC00963-201ENST00000412141 LRRC14Q15048 493 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 WSCD2Q2TBF2 565 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 TMEM52BQ4KMG9 183 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 ATP13A4Q4VNC1 1196 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 BOLA3Q53S33 107 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 PRRT3Q5FWE3 981 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 AFMIDQ63HM1 303 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 CRTC1Q6UUV9 634 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 TMCO3Q6UWJ1 677 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 POLNQ7Z5Q5 900 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 HID1Q8IV36 788 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 PSTKQ8IV42 348 aaKnown RBP11.69□□□□□ -0.54
LINC00963-201ENST00000412141 TP53I13Q8NBR0 393 aaPredicted RBP11.69□□□□□ -0.54
LINC00963-201ENST00000412141 DENND6BQ8NEG7 585 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 FAM174AQ8TBP5 190 aa11.69□□□□□ -0.54
LINC00963-201ENST00000412141 ASB12Q8WXK4 309 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms