RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 TBCCQ15814 346 aa24.72■■□□□ 1.55
VRK2-202ENST00000412104 C1orf53Q5VUE5 145 aa24.72■■□□□ 1.55
VRK2-202ENST00000412104 FAM117BQ6P1L5 589 aa24.72■■□□□ 1.55
VRK2-202ENST00000412104 PTAR1Q7Z6K3 402 aaPredicted RBP24.72■■□□□ 1.55
VRK2-202ENST00000412104 CILP2Q8IUL8 1156 aa24.72■■□□□ 1.55
VRK2-202ENST00000412104 DIS3LQ8TF46 1054 aaKnown RBP24.72■■□□□ 1.55
VRK2-202ENST00000412104 NDNQ99608 321 aa24.72■■□□□ 1.55
VRK2-202ENST00000412104 SPON2Q9BUD6 331 aa24.72■■□□□ 1.55
VRK2-202ENST00000412104 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.72■■□□□ 1.55
VRK2-202ENST00000412104 UBA2Q9UBT2 640 aaPredicted RBP24.72■■□□□ 1.55
VRK2-202ENST00000412104 APOBEC2Q9Y235 224 aaKnown RBP24.72■■□□□ 1.55
VRK2-202ENST00000412104 KCTD3Q9Y597 815 aa24.72■■□□□ 1.55
VRK2-202ENST00000412104 SERPINF2P08697 491 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 GLDCP23378 1020 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 CLCN5P51795 746 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 UBAP2LQ14157 1087 aaKnown RBP24.71■■□□□ 1.55
VRK2-202ENST00000412104 BTG3Q14201 252 aaPredicted RBP24.71■■□□□ 1.55
VRK2-202ENST00000412104 GALNT3Q14435 633 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 VEPH1Q14D04 833 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 TSNAXIP1Q2TAA8 658 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 GALNT7Q86SF2 657 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 SPATA6LQ8N4H0 392 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 HDAC10Q969S8 669 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 WBP2Q969T9 261 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 KLF16Q9BXK1 252 aaPredicted RBP24.71■■□□□ 1.55
VRK2-202ENST00000412104 CDH19Q9H159 772 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 RC3H2Q9HBD1 1191 aaKnown RBP24.71■■□□□ 1.55
VRK2-202ENST00000412104 TMEM39AQ9NV64 488 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 TAS2R1Q9NYW7 299 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 SEPT3Q9UH03 358 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 AGO1Q9UL18 857 aaKnown RBP24.71■■□□□ 1.55
VRK2-202ENST00000412104 PRR5-ARHGAP8B1AHC4 643 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 KDELR3O43731 214 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 EPOP01588 193 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 PRKAA2P54646 552 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 PRAMEP78395 509 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 ARHGAP8P85298 464 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 RCN2Q14257 317 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 CHST9Q7L1S5 443 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 OR6P1Q8NGX9 317 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 BLOC1S5Q8TDH9 187 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 OLFM1Q99784 485 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 CINPQ9BW66 212 aaPredicted RBP24.71■■□□□ 1.55
VRK2-202ENST00000412104 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.71■■□□□ 1.55
VRK2-202ENST00000412104 SORCS3Q9UPU3 1222 aa24.71■■□□□ 1.55
VRK2-202ENST00000412104 PLXNA4Q9HCM2 1894 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 ILVBLA1L0T0 632 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 GSC2O15499 205 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 RHOCP08134 193 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 CPA2P48052 419 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 GRIA4P48058 902 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 DEFB103AP81534 67 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 TWF1Q12792 350 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 USP4Q13107 963 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 ADGRF1Q5T601 910 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 VWA5B1Q5TIE3 1220 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 PSKH2Q96QS6 385 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 UNKQ9C0B0 810 aaKnown RBP24.7■■□□□ 1.54
VRK2-202ENST00000412104 CRISPLD2Q9H0B8 497 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.7■■□□□ 1.54
VRK2-202ENST00000412104 TAGLN3Q9UI15 199 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 ARL5AQ9Y689 179 aa24.7■■□□□ 1.54
VRK2-202ENST00000412104 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.69■■□□□ 1.54
VRK2-202ENST00000412104 A0A1B0GVM2 712 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 TCAF2A6NFQ2 919 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 OR51F1A6NGY5 319 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 ACVR1Q04771 509 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 ZNF177Q13360 481 aaPredicted RBP24.69■■□□□ 1.54
VRK2-202ENST00000412104 TEX9Q8N6V9 391 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 PNPLA1Q8N8W4 532 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 TDRD5Q8NAT2 981 aaKnown RBP24.69■■□□□ 1.54
VRK2-202ENST00000412104 DRC3Q9H069 523 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 PRRG1O14668 218 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 DLX3O60479 287 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 TSPAN3O60637 253 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 URODP06132 367 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 CHRNGP07510 517 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 CCND1P24385 295 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 RFC2P35250 354 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 RGRP47804 291 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 RAB33AQ14088 237 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 SETD3Q86TU7 594 aaPredicted RBP24.69■■□□□ 1.54
VRK2-202ENST00000412104 HEXDCQ8WVB3 486 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 MOCOSQ96EN8 888 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 TRIB3Q96RU7 358 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 MRPL46Q9H2W6 279 aaKnown RBP24.69■■□□□ 1.54
VRK2-202ENST00000412104 ACSS2Q9NR19 701 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 IGSF5Q9NSI5 407 aa24.69■■□□□ 1.54
VRK2-202ENST00000412104 MARCH4Q9P2E8 410 aaPredicted RBP24.69■■□□□ 1.54
VRK2-202ENST00000412104 ABHD14A-ACY1A0A1B0GW23 586 aa24.68■■□□□ 1.54
VRK2-202ENST00000412104 DIAPH2O60879 1101 aa24.68■■□□□ 1.54
VRK2-202ENST00000412104 AOC1P19801 751 aa24.68■■□□□ 1.54
VRK2-202ENST00000412104 KPNA2P52292 529 aaKnown RBP24.68■■□□□ 1.54
VRK2-202ENST00000412104 LAMB3Q13751 1172 aa24.68■■□□□ 1.54
VRK2-202ENST00000412104 SLC14A2Q15849 920 aa24.68■■□□□ 1.54
VRK2-202ENST00000412104 LDB1Q86U70 411 aaPredicted RBP24.68■■□□□ 1.54
VRK2-202ENST00000412104 LMNTD2Q8IXW0 634 aa24.68■■□□□ 1.54
VRK2-202ENST00000412104 AUTS2Q8WXX7 1259 aa24.68■■□□□ 1.54
VRK2-202ENST00000412104 PEX13Q92968 403 aa24.68■■□□□ 1.54
VRK2-202ENST00000412104 DNAJC1Q96KC8 554 aaKnown RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms