RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 FAXCQ5TGI0 409 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 SV2AQ7L0J3 742 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 PHACTR4Q8IZ21 702 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 LGI2Q8N0V4 545 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 SIX6OS1Q8N1H7 587 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 ARL10Q8N8L6 244 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 KYQ8NBH2 561 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 NEK11Q8NG66 645 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 APOBEC4Q8WW27 367 aaKnown RBP7.06□□□□□ -1.28
LSM8-202ENST00000411938 SCG3Q8WXD2 468 aaKnown RBP7.06□□□□□ -1.28
LSM8-202ENST00000411938 RNF34Q969K3 372 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 SLC17A9Q9BYT1 436 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 EDEM3Q9BZQ6 932 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 IMPG2Q9BZV3 1241 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 SLC13A1Q9BZW2 595 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 NUCKS1Q9H1E3 243 aaKnown RBP7.06□□□□□ -1.28
LSM8-202ENST00000411938 VIPAS39Q9H9C1 493 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 NHEJ1Q9H9Q4 299 aaPredicted RBP7.06□□□□□ -1.28
LSM8-202ENST00000411938 MED4Q9NPJ6 270 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 CASS4Q9NQ75 786 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 PRDM8Q9NQV8 689 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 GPR27Q9NS67 375 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 ABCC13Q9NSE7 274 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 AKAP7Q9P0M2 348 aaPredicted RBP7.06□□□□□ -1.28
LSM8-202ENST00000411938 GGT7Q9UJ14 662 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 TP53TG5Q9Y2B4 290 aa7.06□□□□□ -1.28
LSM8-202ENST00000411938 FARP1Q9Y4F1 1045 aaPredicted RBP7.06□□□□□ -1.28
LSM8-202ENST00000411938 ABCA2Q9BZC7 2435 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 EFCAB7A8K855 629 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 M0QYT0 321 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 TULP2O00295 520 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 SPINT1O43278 529 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 ATP9BO43861 1147 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 LCA5LO95447 670 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 MOCS2O96007 188 aaPredicted RBP7.05□□□□□ -1.28
LSM8-202ENST00000411938 IGLV3-27P01718 113 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 CCL4P13236 92 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 TSHRP16473 764 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 NR1D1P20393 614 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 GRNP28799 593 aaKnown RBP7.05□□□□□ -1.28
LSM8-202ENST00000411938 CHRNA3P32297 505 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 RPS21P63220 83 aaKnown RBP7.05□□□□□ -1.28
LSM8-202ENST00000411938 DLG4P78352 724 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 CLDN10P78369 228 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 ZFP36L1Q07352 338 aaKnown RBP7.05□□□□□ -1.28
LSM8-202ENST00000411938 KIF5AQ12840 1032 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 SGCGQ13326 291 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 SLC12A1Q13621 1099 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 SPA17Q15506 151 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 TCEA2Q15560 299 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 DEFB109BQ30KR1 87 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 VWA3BQ502W6 1294 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 HSP90B2PQ58FF3 399 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 FAM26FQ5R3K3 315 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 C1QL3Q5VWW1 255 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 CCDC70Q6NSX1 233 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 MSANTD2Q6P1R3 559 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 ERN2Q76MJ5 926 aaKnown RBP7.05□□□□□ -1.28
LSM8-202ENST00000411938 EPM2AIP1Q7L775 607 aaPredicted RBP7.05□□□□□ -1.28
LSM8-202ENST00000411938 ZNF572Q7Z3I7 529 aaPredicted RBP7.05□□□□□ -1.28
LSM8-202ENST00000411938 TMPRSS9Q7Z410 1059 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 CCNJLQ8IV13 435 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 CACNA2D3Q8IZS8 1091 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 ANKRD52Q8NB46 1076 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 TRIM58Q8NG06 486 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 PCDH19Q8TAB3 1148 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 GPBAR1Q8TDU6 330 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 TATDN2Q93075 761 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 AZIN2Q96A70 460 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 FEM1CQ96JP0 617 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 ALS2CR12Q96Q35 445 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 LRRC61Q9BV99 259 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 NIF3L1Q9GZT8 377 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 CLPBQ9H078 707 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 NDST4Q9H3R1 872 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 SLC25A13Q9UJS0 675 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 GPR34Q9UPC5 381 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 HYOU1Q9Y4L1 999 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 RNF215Q9Y6U7 377 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 SVILO95425 2214 aa7.05□□□□□ -1.28
LSM8-202ENST00000411938 NYNRINQ9P2P1 1898 aaKnown RBP7.04□□□□□ -1.28
LSM8-202ENST00000411938 SSU72P8A0A1W2PR75 194 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 RCCD1A6NED2 376 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 WIPF3A6NGB9 483 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 MKRN2OSH3BPM6 223 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 CAPN5O15484 640 aaPredicted RBP7.04□□□□□ -1.28
LSM8-202ENST00000411938 PJA2O43164 708 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 DUX1O43812 170 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 CLDN1O95832 211 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 CTSLP07711 333 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 CELA2BP08218 269 aaPredicted RBP7.04□□□□□ -1.28
LSM8-202ENST00000411938 UGT1A3P35503 534 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 RECQLP46063 649 aaPredicted RBP7.04□□□□□ -1.28
LSM8-202ENST00000411938 PPARDQ03181 441 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 PTK2BQ14289 1009 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 C16orf72Q14CZ0 275 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 GOLGA7BQ2TAP0 167 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 KRTAP21-3Q3LHN1 58 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 ZCWPW2Q504Y3 356 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 KIAA1161Q6NSJ0 714 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms