RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 TPSAB1Q15661 275 aa15.34■□□□□ 0.05
LSM5-207ENST00000410044 ARMC12Q5T9G4 340 aa15.34■□□□□ 0.05
LSM5-207ENST00000410044 PCGF5Q86SE9 256 aa15.34■□□□□ 0.05
LSM5-207ENST00000410044 C1orf210Q8IVY1 113 aa15.34■□□□□ 0.05
LSM5-207ENST00000410044 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.34■□□□□ 0.05
LSM5-207ENST00000410044 PDCD7Q8N8D1 485 aaKnown RBP15.34■□□□□ 0.05
LSM5-207ENST00000410044 DTWD2Q8NBA8 298 aa15.34■□□□□ 0.05
LSM5-207ENST00000410044 SEC14L1Q92503 715 aa15.34■□□□□ 0.05
LSM5-207ENST00000410044 ARRDC3Q96B67 414 aa15.34■□□□□ 0.05
LSM5-207ENST00000410044 LRRC40Q9H9A6 602 aa15.34■□□□□ 0.05
LSM5-207ENST00000410044 RRAGDQ9NQL2 400 aaPredicted RBP15.34■□□□□ 0.05
LSM5-207ENST00000410044 SPATA6Q9NWH7 488 aaPredicted RBP15.34■□□□□ 0.05
LSM5-207ENST00000410044 UBP1Q9NZI7 540 aa15.34■□□□□ 0.05
LSM5-207ENST00000410044 USP36Q9P275 1121 aaKnown RBP15.34■□□□□ 0.05
LSM5-207ENST00000410044 TPX2Q9ULW0 747 aaKnown RBP15.34■□□□□ 0.05
LSM5-207ENST00000410044 CHKBQ9Y259 395 aa15.34■□□□□ 0.05
LSM5-207ENST00000410044 C16orf96A6NNT2 1141 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 EFCAB8A8MWE9 144 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 ANKRD66B4E2M5 251 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 SMAPO00193 183 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 KPNA3O00505 521 aaPredicted RBP15.33■□□□□ 0.04
LSM5-207ENST00000410044 NDC80O14777 642 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 MID1O15344 667 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 SLC7A4O43246 635 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 NDST3O95803 873 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 PDHA1P08559 390 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 TDGF1P13385 188 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 ADCY8P40145 1251 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 PSMD8P48556 350 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 NUBP1P53384 320 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 METAP1P53582 386 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 UGP2Q16851 508 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 FAXCQ5TGI0 409 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 NAPEPLDQ6IQ20 393 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 C8orf74Q6P047 294 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 ERN2Q76MJ5 926 aaKnown RBP15.33■□□□□ 0.04
LSM5-207ENST00000410044 LINC00523Q86TU6 105 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 KBTBD6Q86V97 674 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 ZSWIM9Q86XI8 627 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 MAML2Q8IZL2 1156 aaPredicted RBP15.33■□□□□ 0.04
LSM5-207ENST00000410044 AADATQ8N5Z0 425 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 NAT8LQ8N9F0 302 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 MCUQ8NE86 351 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 MDGA1Q8NFP4 955 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 CPT1BQ92523 772 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 RAB7BQ96AH8 199 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 TRIM51Q9BSJ1 452 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 ADGRE3Q9BY15 652 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 RAB17Q9H0T7 212 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 SLC6A17Q9H1V8 727 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 ASIC3Q9UHC3 531 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 FBXO4Q9UKT5 387 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 FZD4Q9ULV1 537 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 UTP11Q9Y3A2 253 aaKnown RBP15.33■□□□□ 0.04
LSM5-207ENST00000410044 PCDHB9Q9Y5E1 797 aa15.33■□□□□ 0.04
LSM5-207ENST00000410044 A0A0C4DFX4 3053 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 E7EVH7 732 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 ZNF217O75362 1048 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 SLU7O95391 586 aaKnown RBP15.32■□□□□ 0.04
LSM5-207ENST00000410044 AGTP01019 485 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 APRTP07741 180 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 ATXN1LP0C7T5 689 aaKnown RBP15.32■□□□□ 0.04
LSM5-207ENST00000410044 ITIH2P19823 946 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 HLA-DPA1P20036 260 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 VPS41P49754 854 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 NEK3P51956 506 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 BASP1P80723 227 aaKnown RBP15.32■□□□□ 0.04
LSM5-207ENST00000410044 CNTN1Q12860 1018 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 CBLBQ13191 982 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 MSLNQ13421 630 aaPredicted RBP15.32■□□□□ 0.04
LSM5-207ENST00000410044 SLC1A5Q15758 541 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 KCTD19Q17RG1 926 aaPredicted RBP15.32■□□□□ 0.04
LSM5-207ENST00000410044 TTC31Q49AM3 519 aaPredicted RBP15.32■□□□□ 0.04
LSM5-207ENST00000410044 RNASEH2BQ5TBB1 312 aaKnown RBP15.32■□□□□ 0.04
LSM5-207ENST00000410044 DENND5AQ6IQ26 1287 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 PARS2Q7L3T8 475 aaKnown RBP15.32■□□□□ 0.04
LSM5-207ENST00000410044 HOOK3Q86VS8 718 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 PPIL6Q8IXY8 311 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 NDUFAF2Q8N183 169 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 BBOF1Q8ND07 529 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 LRRN4CLQ8ND94 238 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 IPMKQ8NFU5 416 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 HMGB4Q8WW32 186 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 ERLEC1Q96DZ1 483 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 IFT43Q96FT9 208 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 SCRN2Q96FV2 425 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 SNF8Q96H20 258 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 HHIPQ96QV1 700 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 LYSMD1Q96S90 227 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 TBL1YQ9BQ87 522 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 DYRK4Q9NR20 520 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 FBXL12Q9NXK8 326 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 WHRNQ9P202 907 aa15.32■□□□□ 0.04
LSM5-207ENST00000410044 KMT2EQ8IZD2 1858 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 PLXND1Q9Y4D7 1925 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 A0A0J9YYE9 177 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 UPK3BL1B0FP48 263 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 C10orf142B7Z368 130 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 UPK3BL2E5RIL1 263 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 F5H423 210 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms