RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 UPK3BL2E5RIL1 263 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ARHGAP6O43182 974 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ZRANB2O95218 330 aaKnown RBP eCLIP31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 KRT10P13645 584 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ITIH2P19823 946 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 PPIDQ08752 370 aaKnown RBP31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 FGL2Q14314 439 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 LLGL1Q15334 1064 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TFDP3Q5H9I0 405 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 IL27RAQ6UWB1 636 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 CCDC13Q8IYE1 715 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 RCOR2Q8IZ40 523 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TMEM145Q8NBT3 493 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 CCNYQ8ND76 341 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 RBM41Q96IZ5 413 aaKnown RBP31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 LGMNQ99538 433 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 MYOCQ99972 504 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 NOD2Q9HC29 1040 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 FZD3Q9NPG1 666 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 CA5BQ9Y2D0 317 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 hCG_1818297A0A087WSY0 165 aa31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 PRAMEF26H0Y7S4 382 aa31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 TRAFD1O14545 582 aaPredicted RBP31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 OPHN1O60890 802 aa31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 CER1O95813 267 aa31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 XPAP23025 273 aaPredicted RBP31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 CTNNA2P26232 953 aa31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 TFDP2Q14188 446 aa31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 UGP2Q16851 508 aa31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 ZSCAN30Q86W11 494 aa31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 CCDC50Q8IVM0 306 aa31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 LRRC8AQ8IWT6 810 aa31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 GAREM1Q9H706 876 aa31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 PCDHA3Q9Y5H8 950 aa31.44■■■□□ 2.62
TRAF3IP1-203ENST00000409739 DCDC2BA2VCK2 349 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 CST8O60676 142 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 CCNB1P14635 433 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 HNRNPA2B1P22626 353 aaKnown RBP31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 CTSKP43235 329 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 SUOXP51687 545 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 C21orf59P57076 290 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 ADCY2Q08462 1091 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 HLA-BQ31612 363 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 RALGPS1Q5JS13 557 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 KAZNQ674X7 775 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 SLC17A9Q9BYT1 436 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 IL21RQ9HBE5 538 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 PCDH12Q9NPG4 1184 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 CACNA1AO00555 2505 aa31.43■■■□□ 2.62
TRAF3IP1-203ENST00000409739 PCNX2A6NKB5 2137 aa31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 IGLON5A6NGN9 336 aa31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 AKT2P31751 481 aa31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 ELP6Q0PNE2 266 aa31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 PDK1Q15118 436 aa31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 PPP2R5EQ16537 467 aa31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 SLC45A4Q5BKX6 768 aa31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 ALG1LQ6GMV1 187 aa31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 NT5DC3Q86UY8 548 aa31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 MFSD2AQ8NA29 543 aa31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 POLR1EQ9GZS1 481 aaKnown RBP31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 RBM22Q9NW64 420 aaKnown RBP eCLIP31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 AMACRQ9UHK6 382 aa31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 FNDC3AQ9Y2H6 1198 aaKnown RBP31.42■■■□□ 2.62
TRAF3IP1-203ENST00000409739 TDRD6O60522 2096 aaKnown RBP31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 CCDC66A2RUB6 948 aa31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 PPP1R12AO14974 1030 aaPredicted RBP31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 HTRA2O43464 458 aaPredicted RBP31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 SOCS5O75159 536 aa31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 HLA-DQB2P05538 268 aa31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 PECAM1P16284 738 aaPredicted RBP31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 STAT4Q14765 748 aa31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 CXorf40AQ8TE69 158 aa31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 SKA1Q96BD8 255 aa31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 SEMA3CQ99985 751 aa31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 C1QTNF2Q9BXJ5 285 aa31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 ATP8A1Q9Y2Q0 1164 aa31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 PCDHGC4Q9Y5F7 938 aa31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 CAPN6Q9Y6Q1 641 aa31.41■■■□□ 2.62
TRAF3IP1-203ENST00000409739 KCNK1O00180 336 aa31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 PRKCGP05129 697 aa31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 TGM2P21980 687 aa31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 MMP12P39900 470 aa31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 CCZ1BP86790 482 aa31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 CCZ1P86791 482 aaPredicted RBP31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 ITKQ08881 620 aa31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 TRAF2Q12933 501 aa31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 TMEM52BQ4KMG9 183 aa31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 DGLUCYQ7Z3D6 616 aa31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 SPOCK2Q92563 424 aa31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 WRAP53Q9BUR4 548 aaKnown RBP31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 SAE1Q9UBE0 346 aaPredicted RBP31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 TTLL3Q9Y4R7 772 aa31.4■■■□□ 2.62
TRAF3IP1-203ENST00000409739 SPTBN2O15020 2390 aa31.39■■■□□ 2.62
TRAF3IP1-203ENST00000409739 H0Y8X5 98 aa31.39■■■□□ 2.62
TRAF3IP1-203ENST00000409739 TLR4O00206 839 aa31.39■■■□□ 2.62
TRAF3IP1-203ENST00000409739 RIOK3O14730 519 aaKnown RBP31.39■■■□□ 2.62
TRAF3IP1-203ENST00000409739 RAD51BO15315 384 aa31.39■■■□□ 2.62
TRAF3IP1-203ENST00000409739 NEBLO76041 1014 aa31.39■■■□□ 2.62
TRAF3IP1-203ENST00000409739 PAK4O96013 591 aaPredicted RBP31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms