RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ZNF605Q86T29 641 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 SCUBE1Q8IWY4 988 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 NLGN2Q8NFZ4 835 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 OR10H5Q8NGA6 315 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 C18orf25Q96B23 403 aaPredicted RBP8.46□□□□□ -1.05
SCN9A-203ENST00000409672 NSMCE2Q96MF7 247 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 CNTNAP4Q9C0A0 1308 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 ANKRD63C9JTQ0 380 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 TSPAN9O75954 239 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 UGT2B4P06133 528 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 CCNB1P14635 433 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 DNASE1L1P49184 302 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 SLC30A6Q6NXT4 461 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 C4orf22Q6V702 233 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 ZBTB49Q6ZSB9 765 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 SUGP1Q8IWZ8 645 aaKnown RBP8.46□□□□□ -1.05
SCN9A-203ENST00000409672 UBE2J2Q8N2K1 259 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 ITFG1Q8TB96 612 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 SLC5A5Q92911 643 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 GAL3ST3Q96A11 431 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 ZYG11BQ9C0D3 744 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 UMODL1Q5DID0 1318 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 MGRN1O60291 552 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 SPAG6O75602 509 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 BMP7P18075 431 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 EFNA1P20827 205 aaPredicted RBP8.46□□□□□ -1.06
SCN9A-203ENST00000409672 SLC12A3P55017 1021 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 CDH17Q12864 832 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 GRM2Q14416 872 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 PMF1Q6P1K2 205 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 SGK2Q9HBY8 427 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 ABI3Q9P2A4 366 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 DEC1Q9P2X7 70 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 LRRC72A6NJI9 287 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 PRKCGP05129 697 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 NPR3P17342 541 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 NRLP54845 237 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 RPL38P63173 70 aaKnown RBP8.46□□□□□ -1.06
SCN9A-203ENST00000409672 VPS35Q96QK1 796 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 PTGFRNQ9P2B2 879 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF222Q9UK12 451 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 IKZF2Q9UKS7 526 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 TREHO43280 583 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 ATP8B1O43520 1251 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 NOS1APO75052 506 aaPredicted RBP8.46□□□□□ -1.06
SCN9A-203ENST00000409672 GCATO75600 419 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 AKAP3O75969 853 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 CATP04040 527 aaKnown RBP8.46□□□□□ -1.06
SCN9A-203ENST00000409672 INHAP05111 366 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 MC4RP32245 332 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 TMED10P49755 219 aaKnown RBP8.46□□□□□ -1.06
SCN9A-203ENST00000409672 ARF3P61204 181 aaPredicted RBP8.46□□□□□ -1.06
SCN9A-203ENST00000409672 ARF1P84077 181 aaKnown RBP8.46□□□□□ -1.06
SCN9A-203ENST00000409672 GRTP1Q5TC63 336 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 NYAP1Q6ZVC0 841 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 USP38Q8NB14 1042 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 ACTL9Q8TC94 416 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 LMAN2LQ9H0V9 348 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 CRISPLD1Q9H336 500 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 PRKCHP24723 683 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 GDI1P31150 447 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 GALNT7Q86SF2 657 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 GMIPQ9P107 970 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 EVLQ9UI08 416 aaPredicted RBP8.46□□□□□ -1.06
SCN9A-203ENST00000409672 GGA2Q9UJY4 613 aa8.46□□□□□ -1.06
SCN9A-203ENST00000409672 TIMM8BQ9Y5J9 83 aaPredicted RBP8.46□□□□□ -1.06
SCN9A-203ENST00000409672 CFAP20Q9Y6A4 193 aaKnown RBP8.46□□□□□ -1.06
SCN9A-203ENST00000409672 KLRG2A4D1S0 409 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 FTH1P02794 183 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 SAGP10523 405 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 MIPP30301 263 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 GNALP38405 381 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 NR0B1P51843 470 aaKnown RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 RAD23AP54725 363 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 ANTXR2P58335 489 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 XKR4Q5GH76 650 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 PCDH20Q8N6Y1 951 aaKnown RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 ZSWIM1Q9BR11 485 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 SEMA6BQ9H3T3 888 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 TMLHEQ9NVH6 421 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 CD44P16070 742 aaKnown RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 CES1P23141 567 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 MAPK8P45983 427 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 PER3P56645 1201 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 HGSNATQ68CP4 663 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 FAIM2Q9BWQ8 316 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 RASSF1Q9NS23 344 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 WBP11Q9Y2W2 641 aaKnown RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 CLTCL1P53675 1640 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 MYO3AQ8NEV4 1616 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 OR10H3O60404 316 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 ZBTB11O95625 1053 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 NUDT17P0C025 328 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 SLC30A9Q6PML9 568 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 RAD9BQ6WBX8 426 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 METTL27Q8N6F8 245 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 CENPIQ92674 756 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 PRCCQ92733 491 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 LINGO1Q96FE5 620 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 NMRAL1Q9HBL8 299 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms