RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CFAP58Q5T655 872 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 SRLQ86TD4 932 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 PARGQ86W56 976 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 BBS5Q8N3I7 341 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 CPLX3Q8WVH0 158 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 TBATAQ96M53 351 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 PSKH2Q96QS6 385 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 KCTD15Q96SI1 283 aaPredicted RBP14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 KCTD5Q9NXV2 234 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 IFNKQ9P0W0 207 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 LHX3Q9UBR4 397 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 USP24Q9UPU5 2620 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 TRPM6Q9BX84 2022 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 AKAP13Q12802 2813 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 POM121BA6NF01 834 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 TPP1O14773 563 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 PIAS2O75928 621 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 GP1BAP07359 652 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 JUPP14923 745 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 NME1P15531 152 aaKnown RBP14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 ABL2P42684 1182 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 ACADVLP49748 655 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 THOP1P52888 689 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 AP1S1P61966 158 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 PROX2Q3B8N5 592 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 CCDC122Q5T0U0 273 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 TMCO3Q6UWJ1 677 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 CYP4V2Q6ZWL3 525 aaPredicted RBP14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 POLNQ7Z5Q5 900 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 PTAR1Q7Z6K3 402 aaPredicted RBP14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 PROSER1Q86XN7 944 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 SLC22A18ASQ8N1D0 253 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 SDR16C5Q8N3Y7 309 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 OR8K1Q8NGG5 319 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 ATL2Q8NHH9 583 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 NSMCE1Q8WV22 266 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 RFFLQ8WZ73 363 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 CELF6Q96J87 481 aaKnown RBP14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 PEBP4Q96S96 227 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 CINPQ9BW66 212 aaPredicted RBP14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 THAP2Q9H0W7 228 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 SP110Q9HB58 689 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 FZD3Q9NPG1 666 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 ZNHIT6Q9NWK9 470 aaKnown RBP14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 GPATCH2LQ9NWQ4 482 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 DNAJC28Q9NX36 388 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 SEPT3Q9UH03 358 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 CA5BQ9Y2D0 317 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 ASPMQ8IZT6 3477 aa14.68□□□□□ -0.06
NIF3L1-205ENST00000409588 A0A087X0T9 212 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 SRRM3A6NNA2 597 aaPredicted RBP14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 DFFAO00273 331 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 KRT37O76014 449 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 GYPCP04921 128 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 TPM1P09493 284 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 FAM228BP0C875 321 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 CKMT1AP12532 417 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 BLKP51451 505 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 BCL2L1Q07817 233 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 FZD2Q14332 565 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 LRRC14Q15048 493 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 SPECC1LQ69YQ0 1117 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 DHRS13Q6UX07 377 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 ARHGAP12Q8IWW6 846 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 MYOCQ99972 504 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 NUP85Q9BW27 656 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 TRIM7Q9C029 511 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 HAUS2Q9NVX0 235 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 UVRAGQ9P2Y5 699 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 SALL4Q9UJQ4 1053 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 ANAPC7Q9UJX3 599 aa14.67□□□□□ -0.06
NIF3L1-205ENST00000409588 TRABD2BA6NFA1 517 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 RAD51BO15315 384 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 SIGLEC6O43699 453 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 MMP20O60882 483 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 H2AFZP0C0S5 128 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 RARAP10276 462 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 CES1P23141 567 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 HTR1BP28222 390 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 CASP14P31944 242 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 CDH6P55285 790 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 DNAJC3Q13217 504 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 CAMK2BQ13554 666 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 PDE1CQ14123 709 aaPredicted RBP14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 LBRQ14739 615 aaKnown RBP14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 ZCCHC8Q6NZY4 707 aaKnown RBP14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 H2AFVQ71UI9 128 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 MAP7D3Q8IWC1 876 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 TSEN2Q8NCE0 465 aaKnown RBP14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 FAM71BQ8TC56 605 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 GLMNQ92990 594 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 ECHDC3Q96DC8 303 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 NRSN2Q9GZP1 204 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 SPASTQ9UBP0 616 aa14.66□□□□□ -0.06
NIF3L1-205ENST00000409588 SSU72P8A0A1W2PR75 194 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 TRIM38O00635 465 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 INSIG1O15503 277 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 SPINT1O43278 529 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms