RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ENAHQ8N8S7 591 aaPredicted RBP5.59□□□□□ -1.52
CLK1-202ENST00000409403 ANKRD53Q8N9V6 530 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 BBOF1Q8ND07 529 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 CATSPER1Q8NEC5 780 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 FBXO25Q8TCJ0 367 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 MORC4Q8TE76 937 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 C10orf82Q8WW14 230 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 PMM1Q92871 262 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 RAB24Q969Q5 203 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 EME1Q96AY2 570 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 SKA1Q96BD8 255 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 RMDN1Q96DB5 314 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 ANKRD36BP1Q96IX9 119 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 SAMD11Q96NU1 681 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 CRAMP1Q96RY5 1269 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 TRIM51Q9BSJ1 452 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 CADM1Q9BY67 442 aaKnown RBP5.59□□□□□ -1.52
CLK1-202ENST00000409403 TRIM31Q9BZY9 425 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 ANKFY1Q9P2R3 1169 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 HERC5Q9UII4 1024 aaKnown RBP5.59□□□□□ -1.52
CLK1-202ENST00000409403 STX8Q9UNK0 236 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 MTO1Q9Y2Z2 717 aaKnown RBP5.59□□□□□ -1.52
CLK1-202ENST00000409403 MYO15AQ9UKN7 3530 aa5.59□□□□□ -1.52
CLK1-202ENST00000409403 DNAH14Q0VDD8 3507 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 HEG1Q9ULI3 1381 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 GVINP1Q7Z2Y8 2422 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 SIPA1L3O60292 1781 aaPredicted RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 MYH6P13533 1939 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 COL4A3Q01955 1670 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 PVALEFA0A1B0GWK0 134 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 CAPN8A6NHC0 703 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 H3BNX3 289 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 FBP2O00757 339 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 ADCY6O43306 1168 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 GPR32O75388 356 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 IDH1O75874 414 aaKnown RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 TPPPO94811 219 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 CBX6O95503 412 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 FGGP02679 453 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 ABHD2P08910 425 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 T-ENOLP0DO92 83 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 KRT13P13646 458 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 PTPN2P17706 415 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 GTF2H1P32780 548 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 PGM1P36871 562 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 IL6STP40189 918 aaPredicted RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 CETN2P41208 172 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 SLCO1A2P46721 670 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 ARFIP2P53365 341 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 CACNB3P54284 484 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 NR1H2P55055 460 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 ASIC1P78348 528 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 SF3A3Q12874 501 aaKnown RBP eCLIP5.58□□□□□ -1.527e-7■■■□□ 14.6
CLK1-202ENST00000409403 PDK3Q15120 406 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 VMACQ2NL98 169 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 MMEL1Q495T6 779 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 ZC2HC1CQ53FD0 456 aaPredicted RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 IL23RQ5VWK5 629 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 SPTY2D1Q68D10 685 aaPredicted RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 IL31Q6EBC2 164 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 DARS2Q6PI48 645 aaKnown RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 SLC2A7Q6PXP3 512 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 KYAT3Q6YP21 454 aaKnown RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 RBM44Q6ZP01 1051 aaKnown RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 ANO5Q75V66 913 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 MIER3Q7Z3K6 550 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 C11orf96Q7Z7L8 435 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 SATL1Q86VE3 508 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 LRRC6Q86X45 466 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 TBC1D10CQ8IV04 446 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 UBL4BQ8N7F7 174 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 FAM133AQ8N9E0 248 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 TERB1Q8NA31 727 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 FANCBQ8NB91 859 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 TP53I13Q8NBR0 393 aaPredicted RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 ICA1LQ8NDH6 482 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 DDHD1Q8NEL9 900 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 CXorf38Q8TB03 319 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 USP6NLQ92738 828 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 STAMQ92783 540 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 ART4Q93070 314 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 BORCS5Q969J3 196 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 MRGPRX4Q96LA9 322 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 DMRTA2Q96SC8 542 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 OLFM1Q99784 485 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 CCT7Q99832 543 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 LSM14BQ9BX40 385 aaKnown RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 STK33Q9BYT3 514 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 CRNKL1Q9BZJ0 848 aaKnown RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 KLHL4Q9C0H6 718 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 SENP6Q9GZR1 1112 aaPredicted RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 C17orf75Q9HAS0 396 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 USP29Q9HBJ7 922 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 TRPC7Q9HCX4 862 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 TMEM140Q9NV12 185 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 UBAP1Q9NZ09 502 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 CLIC5Q9NZA1 410 aa5.58□□□□□ -1.52
CLK1-202ENST00000409403 PACSIN2Q9UNF0 486 aaPredicted RBP5.58□□□□□ -1.52
CLK1-202ENST00000409403 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.58□□□□□ -1.52
CLK1-202ENST00000409403 NR2E1Q9Y466 385 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms