RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 GIT2Q14161 759 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 FSCN1Q16658 493 aaKnown RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 INO80EQ8NBZ0 244 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 SRFBP1Q8NEF9 429 aaKnown RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 FCGR1BQ92637 280 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 EFHD2Q96C19 240 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 TTYH1Q9H313 450 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 XPNPEP3Q9NQH7 507 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 PSMD11O00231 422 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 TRMUO75648 421 aaKnown RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 SERPINA4P29622 427 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 GRB14Q14449 540 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 EIF2S3LQ2VIR3 472 aaKnown RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 GJB7Q6PEY0 223 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 CNSTQ6PJW8 725 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 NKRFO15226 690 aaKnown RBP eCLIP12.22□□□□□ -0.458e-7■■■□□ 18.4
SHANK2-203ENST00000409161 NUDT17P0C025 328 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 MYBL2P10244 700 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 NPTX2P47972 431 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 TKTL1P51854 596 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 EIF5AL1Q6IS14 154 aaKnown RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 QSOX2Q6ZRP7 698 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 PHC3Q8NDX5 983 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 MAN2B2Q9Y2E5 1009 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 DLG1Q12959 904 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 LRRC38Q5VT99 294 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 AKAP1Q92667 903 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 ELL3Q9HB65 397 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 MCIDASD6RGH6 385 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 HDAC3O15379 428 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 OR10H3O60404 316 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 AVILO75366 819 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 NADKO95544 446 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 RPL4P36578 427 aaKnown RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 SREBF2Q12772 1141 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 PIK3R6Q5UE93 754 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 FAM136AQ96C01 138 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 TTLL2Q9BWV7 592 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 PLIN3O60664 434 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 TCEA3O75764 348 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 PRLP01236 227 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 CTSHP09668 335 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 CETPP11597 493 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 MYBPC1Q00872 1141 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 ACOX1Q15067 660 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 KCNA10Q16322 511 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 MAGEE1Q9HCI5 957 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 TRPS1Q9UHF7 1281 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 ZNRF3Q9ULT6 936 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 A0A0G2JPF8 293 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 HNRNPCL3B7ZW38 293 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 SLC30A4O14863 429 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 HNRNPCL4P0DMR1 293 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 GRIA4P48058 902 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 MTX3Q5HYI7 312 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 FAM171BQ6P995 826 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 GPRIN3Q6ZVF9 776 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 FAM131BQ86XD5 332 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 AHCYL2Q96HN2 611 aaKnown RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 TRNAU1APQ9NX07 287 aaKnown RBP12.22□□□□□ -0.45
SHANK2-203ENST00000409161 AXIN2Q9Y2T1 843 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 CCR3P51677 355 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 TMEM62Q0P6H9 643 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 SEMA4DQ92854 862 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 ZFYVE28Q9HCC9 887 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 GIN1Q9NXP7 522 aa12.22□□□□□ -0.45
SHANK2-203ENST00000409161 GCATO75600 419 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 VAPBO95292 243 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 SSTR1P30872 391 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 ARMC12Q5T9G4 340 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 AFTPHQ6ULP2 937 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 PQLC1Q8N2U9 271 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 ZNF224Q9NZL3 707 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 MARK1Q9P0L2 795 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 RSL1D1O76021 490 aaKnown RBP12.21□□□□□ -0.45
SHANK2-203ENST00000409161 FTH1P02794 183 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 RAB10P61026 200 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 ATP6V0D1P61421 351 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 AP1S1P61966 158 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 AMHR2Q16671 573 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 CHST15Q7LFX5 561 aaPredicted RBP12.21□□□□□ -0.45
SHANK2-203ENST00000409161 CRB1P82279 1406 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 FDPSP14324 419 aaKnown RBP12.21□□□□□ -0.45
SHANK2-203ENST00000409161 RPS12P25398 132 aaKnown RBP12.21□□□□□ -0.45
SHANK2-203ENST00000409161 RXRBP28702 533 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 AXLP30530 894 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 CYP4F2P78329 520 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 IFI35P80217 286 aaPredicted RBP12.21□□□□□ -0.45
SHANK2-203ENST00000409161 CYP4F3Q08477 520 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 DPYSL3Q14195 570 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 C12orf56Q8IXR9 622 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 C11orf24Q96F05 449 aaPredicted RBP12.21□□□□□ -0.45
SHANK2-203ENST00000409161 NDNQ99608 321 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 AASSQ9UDR5 926 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 NR2F1P10589 423 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 RALGDSQ12967 914 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 SPESP1Q6UW49 350 aa12.21□□□□□ -0.45
SHANK2-203ENST00000409161 RAB2BQ8WUD1 216 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms