RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 RANBP2P49792 3224 aaKnown RBP11.32□□□□□ -0.6
RAB1C-201ENST00000409159 TRANK1O15050 2925 aa11.32□□□□□ -0.6
RAB1C-201ENST00000409159 ZCWPW2A0A1B0GU75 182 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 OTOL1A6NHN0 477 aaPredicted RBP11.31□□□□□ -0.6
RAB1C-201ENST00000409159 ANKRD66B4E2M5 251 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 K7ERQ8 282 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 TRAFD1O14545 582 aaPredicted RBP11.31□□□□□ -0.6
RAB1C-201ENST00000409159 RGS16O15492 202 aaPredicted RBP11.31□□□□□ -0.6
RAB1C-201ENST00000409159 SMAD6O43541 496 aaKnown RBP11.31□□□□□ -0.6
RAB1C-201ENST00000409159 SIN3BO75182 1162 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 BANF1O75531 89 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 PRLP01236 227 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 C1QAP02745 245 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 SHBGP04278 402 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 APODP05090 189 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 OPRD1P41143 372 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 CTSOP43234 321 aaPredicted RBP11.31□□□□□ -0.6
RAB1C-201ENST00000409159 SERPINB9P50453 376 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 SUOXP51687 545 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 POLR2LP62875 67 aaKnown RBP11.31□□□□□ -0.6
RAB1C-201ENST00000409159 PFKPQ01813 784 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 DNAJC3Q13217 504 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 GRM2Q14416 872 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 PCSK7Q16549 785 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 PTPRNQ16849 979 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 LONRF1Q17RB8 773 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 SKIDA1Q1XH10 827 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 PDPK2PQ6A1A2 396 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 KIAA0930Q6ICG6 404 aaPredicted RBP11.31□□□□□ -0.6
RAB1C-201ENST00000409159 BRAT1Q6PJG6 821 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 ADGRD1Q6QNK2 874 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 MARK2Q7KZI7 788 aaKnown RBP11.31□□□□□ -0.6
RAB1C-201ENST00000409159 GALNT7Q86SF2 657 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 SLC26A11Q86WA9 606 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 RALGPS2Q86X27 583 aaPredicted RBP11.31□□□□□ -0.6
RAB1C-201ENST00000409159 RAVER1Q8IY67 606 aaKnown RBP11.31□□□□□ -0.6
RAB1C-201ENST00000409159 MPP5Q8N3R9 675 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 CSGALNACT1Q8TDX6 532 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 SLC44A1Q8WWI5 657 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 ECHDC3Q96DC8 303 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 CFAP36Q96G28 342 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 LRCH3Q96II8 777 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 ZFYVE19Q96K21 471 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 ATP6V1G3Q96LB4 118 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 LYSMD1Q96S90 227 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 APOL2Q9BQE5 337 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 HEPHQ9BQS7 1158 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 BRD9Q9H8M2 597 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 TREX1Q9NSU2 369 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 EURLQ9NYK6 297 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 PSMC3IPQ9P2W1 217 aaPredicted RBP11.31□□□□□ -0.6
RAB1C-201ENST00000409159 SUN2Q9UH99 717 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 PHTF1Q9UMS5 762 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 ACTL7AQ9Y615 435 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 IKBKGQ9Y6K9 419 aa11.31□□□□□ -0.6
RAB1C-201ENST00000409159 EDDM13A0A1B0GTR0 161 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 TSPAN11A1L157 253 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 H3BQ06 376 aaPredicted RBP11.3□□□□□ -0.6
RAB1C-201ENST00000409159 SLC7A4O43246 635 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 HNRNPLP14866 589 aaKnown RBP eCLIP11.3□□□□□ -0.6
RAB1C-201ENST00000409159 FOSL2P15408 326 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 KCNA5P22460 613 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 MSH2P43246 934 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 SLC6A11P48066 632 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 PTPN5P54829 565 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 FAM193AP78312 1265 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 TRAF2Q12933 501 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 ENPP2Q13822 863 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 TAF1AQ15573 450 aaPredicted RBP11.3□□□□□ -0.6
RAB1C-201ENST00000409159 HNRNPA1L2Q32P51 320 aaKnown RBP11.3□□□□□ -0.6
RAB1C-201ENST00000409159 HP1BP3Q5SSJ5 553 aaPredicted RBP11.3□□□□□ -0.6
RAB1C-201ENST00000409159 TSTD2Q5T7W7 516 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 KIAA0408Q6ZU52 694 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 TAOK1Q7L7X3 1001 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 C12orf40Q86WS4 652 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 CNTN4Q8IWV2 1026 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 OR2A12Q8NGT7 310 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 OR2W6PQ8NHA6 318 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 CALML6Q8TD86 181 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 STYXQ8WUJ0 223 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 PIH1D2Q8WWB5 315 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 TLCD1Q96CP7 247 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 RMDN1Q96DB5 314 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 MTBPQ96DY7 904 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 CERS2Q96G23 380 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 MYO19Q96H55 970 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 CIPCQ9C0C6 399 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 SUV39H2Q9H5I1 410 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 CHRAC1Q9NRG0 131 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 THAP10Q9P2Z0 257 aaPredicted RBP11.3□□□□□ -0.6
RAB1C-201ENST00000409159 DKK3Q9UBP4 350 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 SLCO3A1Q9UIG8 710 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 CHKBQ9Y259 395 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 PCDHGC4Q9Y5F7 938 aa11.3□□□□□ -0.6
RAB1C-201ENST00000409159 NYNRINQ9P2P1 1898 aaKnown RBP11.29□□□□□ -0.6
RAB1C-201ENST00000409159 IQANK1A0A1B0GTG1 560 aa11.29□□□□□ -0.6
RAB1C-201ENST00000409159 TBC1D3BA6NDS4 549 aa11.29□□□□□ -0.6
RAB1C-201ENST00000409159 C2orf81A6NN90 581 aa11.29□□□□□ -0.6
RAB1C-201ENST00000409159 A6NNZ2 444 aa11.29□□□□□ -0.6
RAB1C-201ENST00000409159 LDB2O43679 373 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms