RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 DPPA5A6NC42 116 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 TRPC5OSA6NMA1 111 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 SYN3O14994 580 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 JUNP05412 331 aaKnown RBP16.97■□□□□ 0.31
NUP50-203ENST00000407019 PAX7P23759 505 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 CDC16Q13042 620 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 HERC3Q15034 1050 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 TRIP4Q15650 581 aaPredicted RBP16.97■□□□□ 0.31
NUP50-203ENST00000407019 GSTA3Q16772 222 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 ZNF789Q5FWF6 425 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 RAP1GAP2Q684P5 730 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 TEX26Q8N6G2 289 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 OR13J1Q8NGT2 312 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 LINC01599Q8WXQ3 324 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 FBXO32Q969P5 355 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 IL37Q9NZH6 218 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 TADA2AO75478 443 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 SKAP2O75563 359 aaPredicted RBP16.96■□□□□ 0.31
NUP50-203ENST00000407019 LTA4HP09960 611 aaKnown RBP16.96■□□□□ 0.31
NUP50-203ENST00000407019 CD1EP15812 388 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 PFKPQ01813 784 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 TNK2Q07912 1038 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 MSLNQ13421 630 aaPredicted RBP16.96■□□□□ 0.31
NUP50-203ENST00000407019 CTXN3Q4LDR2 81 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 SH2D4BQ5SQS7 431 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 TMEM198Q66K66 360 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 KLC3Q6P597 504 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 GALNT7Q86SF2 657 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 TTC9BQ8N6N2 239 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 KYQ8NBH2 561 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 IGSF8Q969P0 613 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 CCDC126Q96EE4 140 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 SERPINI1Q99574 410 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 VCX3BQ9H321 246 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 OLA1Q9NTK5 396 aaKnown RBP16.96■□□□□ 0.31
NUP50-203ENST00000407019 GTSE1Q9NYZ3 720 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 SCOCQ9UIL1 159 aa16.96■□□□□ 0.31
NUP50-203ENST00000407019 SLC7A4O43246 635 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 LINGO3P0C6S8 592 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 YWHAQP27348 245 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 FAM189BP81408 668 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 HECTD2Q5U5R9 776 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 FBXL22Q6P050 247 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 MIB1Q86YT6 1006 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 RNF135Q8IUD6 432 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 CILP2Q8IUL8 1156 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 APLFQ8IW19 511 aaPredicted RBP16.95■□□□□ 0.3
NUP50-203ENST00000407019 DSELQ8IZU8 1212 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 ATAD1Q8NBU5 361 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 HIPK4Q8NE63 616 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 GPR152Q8TDT2 470 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 ZBTB26Q9HCK0 441 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 DLGAP2Q9P1A6 1054 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 FAM92AA1XBS5 289 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 MAGEA13PA6NCF6 341 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 NEMP2A6NFY4 417 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 MROH6A6NGR9 719 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 TMEM233B4DJY2 109 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 RAMP2O60895 175 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 TBX18O95935 607 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 ELNP15502 786 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 TM4SF4P48230 202 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 MBTPS1Q14703 1052 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 SLC14A2Q15849 920 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 TRAF7Q6Q0C0 670 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 BNC2Q6ZN30 1099 aaPredicted RBP16.95■□□□□ 0.3
NUP50-203ENST00000407019 RNF111Q6ZNA4 994 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 PTAR1Q7Z6K3 402 aaPredicted RBP16.95■□□□□ 0.3
NUP50-203ENST00000407019 TADA1Q96BN2 335 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 RCN3Q96D15 328 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 MAELQ96JY0 434 aaKnown RBP16.95■□□□□ 0.3
NUP50-203ENST00000407019 NR1H4Q96RI1 486 aaPredicted RBP16.95■□□□□ 0.3
NUP50-203ENST00000407019 MFSD1Q9H3U5 465 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.95■□□□□ 0.3
NUP50-203ENST00000407019 MARCH2Q9P0N8 246 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 UXTQ9UBK9 157 aaPredicted RBP16.95■□□□□ 0.3
NUP50-203ENST00000407019 STK39Q9UEW8 545 aa16.95■□□□□ 0.3
NUP50-203ENST00000407019 TTC3P53804 2025 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 SDHDO14521 159 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 HMBSP08397 361 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 RBP1P09455 135 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 RAG1P15918 1043 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 SP100P23497 879 aaPredicted RBP16.94■□□□□ 0.3
NUP50-203ENST00000407019 ACLYP53396 1101 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 PRAMEP78395 509 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 SATB1Q01826 763 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 IL10RBQ08334 325 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 IHHQ14623 411 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 POLD3Q15054 466 aaPredicted RBP16.94■□□□□ 0.3
NUP50-203ENST00000407019 SIRPB2Q5JXA9 342 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 C10orf120Q5SQS8 335 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 MAP3K21Q5TCX8 1036 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 RNF180Q86T96 592 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 PGBD5Q8N414 524 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 AFAP1L2Q8N4X5 818 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 OR6P1Q8NGX9 317 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 ARRDC2Q8TBH0 407 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 GATA6Q92908 595 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 FAR2Q96K12 515 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 MARK4Q96L34 752 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms